KEGG   Massilia endophytica: LSQ66_18120
Entry
LSQ66_18120       CDS       T09693                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
meny  Massilia endophytica
Brite
KEGG Orthology (KO) [BR:meny00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:meny03032]
    LSQ66_18120
   03036 Chromosome and associated proteins [BR:meny03036]
    LSQ66_18120
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:meny02048]
    LSQ66_18120
Enzymes [BR:meny01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LSQ66_18120
DNA replication proteins [BR:meny03032]
 Prokaryotic type
  DNA Topoisomerases
   LSQ66_18120
Chromosome and associated proteins [BR:meny03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    LSQ66_18120
Prokaryotic defense system [BR:meny02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    LSQ66_18120
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim
Other DBs
NCBI-ProteinID: UGQ45685
LinkDB
Position
3952584..3954581
AA seq 665 aa
MATKKPVSDYSESSIRVLKGLEPVKQRPGMYTRTENPLHIIQEVIDNASDEALGGHCKNI
IVTQNPDGSVTVDDDGRGIPVGLHPEENVPTVEIVYTRLHAGGKFDKGSGGAYAFSGGLH
GVGVSVTNALSKRLEISVWRKDDKGNGFHTIAFENGDLVQPLASEAAPKDGKKSGTRVTA
WPDPKYFDSPLISQVELQRLLRSKAVLLPGVTVTLINGKTGDKQVWQYNDGLRGYLTEAL
AQTSSGETVVPLFEGEQFAGPDAEGFAEGEGASWVVAWTEEGAIVRESYVNLIPTPNGGT
HESGLRDGLFSAMKNFVELHSLLPKGVKLLPEDVFARASFVLSAKVLDPQFQGQIKERLN
SRDAVRLVSTYSKPALELWLNQHIDYGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLP
GKLTDCESSDTARTELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNSWETDRDRLYAN
NEIHDIAVAIGVDPHSFGDSPDLSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPALI
ENGNICIARPPLYRVDAPARGKKPIQKLYALDDGELTAIEDKLRKDGLKDGSWSISRFKG
LGEMNAEQLWETTMNPDTRRLLPVSLGDFAHTEAAARFNMLMGKGEAAARRAWIEEHGNE
VEADI
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggccactaaaaaacctgtttccgattacagcgaatcatccatccgggtcctcaagggg
ctggaaccagtcaagcagcgtccgggcatgtatacccgcaccgagaacccgctgcacatc
attcaggaagtgatcgacaacgcctccgacgaggcgctcggcggccattgcaaaaacatt
atcgtcacgcagaaccctgacggcagcgtgacggtggacgacgacggccgcggcatcccg
gtcggcctgcaccccgaagaaaacgtgccgacggtggagattgtgtacacccgcctgcac
gcgggcggcaaattcgacaagggctccggcggcgcctacgccttctcgggcggcctgcac
ggcgtgggcgtgtccgtcaccaatgcactctcgaagcgccttgaaatctccgtctggcgc
aaggacgacaagggcaacggcttccacaccatcgccttcgagaacggcgacctcgttcag
ccgctggcctccgaggctgcgccgaaggacggcaagaagtccggcacgcgcgtcaccgcg
tggcctgatccgaaatatttcgattcgcccctgatctcgcaggtggagctccagcgcctg
ctgcgctccaaggccgtgctgctgcccggcgtcaccgtcaccctgatcaacggcaagacc
ggcgataagcaggtatggcagtacaacgacggcctgcgcggctacctcaccgaagcgctg
gcgcaaacctccagcggcgaaaccgtggtgcccctgttcgagggcgagcagttcgccgga
ccggatgcggaaggcttcgcggaaggcgaaggcgcgtcctgggtggtggcatggacggag
gaaggcgccatcgtgcgcgagtcctacgtcaacctgattccaacgccgaacggcggcacc
cacgaatccggcctgcgcgatggcctgttcagcgccatgaagaatttcgtggaactgcac
tcgctgctgccgaaaggcgtgaagctgctgccggaagacgtgtttgcgcgggcttccttt
gtgctgtccgcgaaggtgctggacccgcagttccagggccagatcaaggaacgcctgaat
tcgcgcgatgcggtgcgcctggtatcgacgtattccaagcccgcgctcgaactgtggctg
aaccagcacatcgactatggcaagaagctcgcagagctggtgatcaagcaggcccagtcc
cgcctgcgctcggcgcagaaggtggagaagaagaagtcctccggcgtcgccgtgttgccg
ggcaagctgacggactgcgaatcgagcgacaccgcgcgcactgaactcttcctggtggag
ggcgactctgcgggcggctcggccaagatgggccgcgacaaggaattccaggccatcctg
cccctgcgcggcaaggtgctgaactcctgggagacggaccgcgaccgcctgtacgccaac
aacgagatccacgacatcgccgtggccatcggcgtcgatccgcacagcttcggcgactcg
cccgacctttcgggcctgcgctacgggaagatctgcatcctctccgatgcggacgtggac
ggctcgcacatccaggtgctgctgctcacgctcttcttccgccacttcccggccctgatc
gagaatggcaatatctgcatcgcccgcccgcccctgtaccgggtggacgcgccggcgcgc
ggcaagaagccgatccagaagctctacgcgctggatgacggcgagctcaccgccatcgag
gacaagctgcgcaaggacggcctgaaagacggcagctggtccatctcccgcttcaagggc
ctgggcgagatgaacgccgagcagctgtgggaaaccaccatgaacccggacacccgccgc
ctgctcccggtatcgctgggcgatttcgcccacaccgaagccgccgcgcgcttcaacatg
ctgatgggtaaaggcgaagccgccgcccgccgcgcatggatcgaggagcacggcaacgaa
gtggaagcggacatctaa

DBGET integrated database retrieval system