Massilia endophytica: LSQ66_18725
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Entry
LSQ66_18725 CDS
T09693
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meny03016
]
LSQ66_18725 (tcdA)
Transfer RNA biogenesis [BR:
meny03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LSQ66_18725 (tcdA)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiF
NAD_binding_7
Sacchrp_dh_NADP
ApbA
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
UGQ45802
LinkDB
All DBs
Position
complement(4087199..4088053)
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AA seq
284 aa
AA seq
DB search
MTEHDIDFERRFGGIARLYGEAALARFRSAHICVIGVGGVGSWIVEALARSAVGRLTLID
LDNVAESNINRQIQALSGTLGMAKVTALAERVAQINPYCEVTQIEDFLTADNLDEMIGSR
GYDYVIDAMDSAKVKTALVHYCRSRAIPLIVIGSAGGQTDPTRIEVRDLAKTEQEPLLKK
VRRRLRSQYNYPPNSKNKLNVDAVFSMEPLKFPETGEVCSVDGDDKAPQQGGLTGINCAG
FGSAMVVTATFGMVAAGHLLRKLAAEVEQAPLSAEPAADTVPSP
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacacgacatcgacttcgagcgccgcttcggcggcatcgcccggctttacggc
gaggcagcgctggcccgcttccgcagcgcccacatctgcgtgatcggtgtcggcggcgtg
ggctcctggatcgtggaggcgctggcgcgcagcgccgtcggccgcctgaccctgattgac
ctggacaacgtggccgaatcgaacatcaaccgccagatccaggccctgagcggcactctg
ggcatggccaaggtgacggccttggccgaacgcgtggcccagatcaatccctactgcgaa
gtgacgcagatcgaggacttcctcacggccgacaacctggacgagatgatcggctcgcgc
ggctacgactacgtgatcgacgccatggacagcgccaaggtcaagaccgcgctcgtgcac
tattgccgcagcagggccattcccctgatcgtgatcggcagtgcgggcggccagacggac
cctacccgcatcgaagtgcgcgacctggcgaagacggagcaggagccgctgctgaagaag
gtgcggcgcaggctgcgcagccagtacaactacccgcccaactcgaagaacaagctgaac
gtggacgccgtgttttccatggagccgctgaagttcccggaaacgggcgaggtgtgcagc
gtggacggcgacgacaaggcgccgcagcagggcggcctcacgggcatcaactgcgccggc
ttcggctcggccatggtggtgacggccaccttcggcatggtggcggccggccacctgctg
cgcaagctcgcggccgaagtggagcaggcgccgctcagcgcggagccagcggcagatact
gtcccgtcgccataa
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