Massilia endophytica: LSQ66_19050
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Entry
LSQ66_19050 CDS
T09693
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
meny
Massilia endophytica
Pathway
meny00910
Nitrogen metabolism
meny01100
Metabolic pathways
meny01120
Microbial metabolism in diverse environments
meny01310
Nitrogen cycle
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
LSQ66_19050 (nirB)
Enzymes [BR:
meny01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
LSQ66_19050 (nirB)
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Pyr_redox
Fer2_BFD
NIR_SIR_ferr
Rubredoxin_C
Pyr_redox_3
NAD_binding_7
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
UGQ45863
LinkDB
All DBs
Position
complement(4156503..4159025)
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AA seq
840 aa
AA seq
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MKVLVIGHGMVGHKFLESLADSGASGLEVTVLCEEPRPAYDRVHLSEFFSGKSAEQLSLV
KDGFFENSGYVLKLNARATAIDLAARKVTASTGEVLDYDKLVLATGSFPFVPPLEGRDRK
DCFVYRTIEDLEAMLECGSRARSGVVIGGGLLGLECAKALRDMNLATHVVEFSPRLMAVQ
VDDGGGRILRNKIEELGVTVHTGKNTVAIVDGEEGAHRMQFADGSHLDADMIVFSAGIRP
RDQLARECGLAVGPRGGIQIDNSCLTSDPNVYAIGECALWNGMVYGLVAPGYDMARVAAK
HMLGQAAEFTGADMSTKLKLMGVDVASIGDPHARAEGARSYQFTDERKQVYKKIVVSDCG
KYLLGGVMVGDAGEYGTLLQMMLNRIELPESPEFLILPQSEGGAKPGIGVEALPAGAQIC
SCNDVSKGAICEAVRGGATSIGALKKCTGAGTTCGGCVPLVTQIMKAEMKKLGMDVNNHV
CEHFPHSRQELFHLIRVGGIKTFGELLAQHGKGLGCDVCKPLAASILATCWNDFVLKKEH
ASLQDSNDYFLGNIQKDGTYSVVPRMPGGEVTPDGLIAVGQVAKKHGLYTKITGGQRVDL
FGARVEQLPAIWEELIEAGFETGHAYGKSLRTVKSCVGSTWCRYGVDDSVGLAIELENRY
KGLRTPHKIKFGVSGCTRECAEAQGKDVGIIATDKGWNLYVCGNGGMKPRHAELLASDLD
KATLVSYIDRFLMFYSRTADRLQRTSTWRENLEGGLDYLKQVVIGDKLGIAAELEADMQR
VVDTYACEWKEAVNNPETRKRFRHFVNSEAGDNNVVFMEERGQIRPATVEERKRIPIKVA
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcctggtgatcggccacggtatggtgggccacaaattcctcgaaagcctggcc
gacagcggcgcttccggcctcgaagtgacggtgctgtgcgaagagcctcgtccggcctac
gaccgcgtccacctctccgaattcttctccgggaaaagcgccgaacagctctcgctggtc
aaggacggcttcttcgagaacagcggctatgtgctgaagctgaacgcccgcgccaccgcc
atcgacctcgccgcgcgcaaggtcacggcgagcaccggcgaagtgctggattacgacaag
ctggtgctggccaccggctccttccccttcgttcccccgctggaaggcagggaccgcaag
gactgcttcgtctaccgcaccatcgaagacctggaggccatgctcgaatgcggcagccgc
gcgcgcagcggcgttgtgatcggcggcggcctgctgggcctggaatgcgcgaaggccctg
cgcgacatgaacctggcgacgcacgtcgtcgaattctcgccgcgcctgatggccgtgcag
gtggatgatggcggcggccgcatcctgcgcaacaagatcgaagagctgggcgtgaccgtc
cacaccggcaagaataccgtcgccatcgtggatggcgaggagggcgcccaccggatgcag
ttcgcggacggcagccacctggatgcggacatgattgtgttctcggccggtatccgcccg
cgcgaccagctggcgcgcgagtgcggcctggcggtggggccgcgcggcggcatccagatc
gacaacagctgcctcacctccgacccgaacgtgtacgccatcggcgagtgcgctctctgg
aacggcatggtgtatggcctggtggcgccgggttacgacatggcccgcgtggcggcgaaa
catatgctgggccaggccgccgagttcaccggcgccgacatgagcaccaagctgaaactg
atgggcgtggacgtggccagcatcggcgacccgcacgccagggccgaaggcgcgcgcagc
taccagttcacggacgagcgcaagcaggtctacaagaagatcgtggtgtccgactgcggc
aagtacctgctgggcggcgtcatggtgggcgatgcgggcgagtacggcaccctgttgcag
atgatgctgaaccggatcgagctgccggaatcgccggagttcctgatcctgccgcagtcc
gaaggcggggcgaagccgggcatcggcgtcgaggcgctgcccgctggcgcgcagatctgc
tcctgcaacgacgtgtcgaagggcgccatctgcgaggcggtccgcggcggcgcaacgagc
atcggcgcgctgaagaagtgcacgggcgcgggcaccacctgcggcggctgcgtgcccctc
gtcacccagatcatgaaggccgagatgaagaagctcggcatggacgtgaacaatcatgtc
tgcgaacacttcccgcactcgcgccaggagctgttccacctgatccgcgtgggaggcatc
aagaccttcggcgagctgctggcacagcatggcaagggcctgggctgcgacgtgtgcaag
ccgctggcggccagtatcctcgccacctgctggaacgacttcgtgctgaagaaggagcac
gccagcctgcaggattcgaacgactacttcctcggcaatatccagaaggacggcacctac
tccgtggtgccgcgcatgccgggcggcgaggtgacgccggacggtctgatcgccgtcggc
caggtggccaagaagcacggcctgtacaccaagatcacgggcggccagcgcgtggacctg
ttcggcgcacgcgtcgaacagctgcccgccatctgggaagagctgatcgaggcaggcttc
gagaccggccacgcctacggcaagtccctgcgcacggtgaagtcctgcgtgggctccacc
tggtgccgctacggggtggacgacagcgttggcctcgccatcgagctggaaaaccgctac
aagggcctgcgcacaccgcacaagatcaagttcggcgtatccggctgcacccgcgagtgc
gccgaagcccagggcaaggacgtgggcatcatcgccacggacaagggctggaacctctac
gtgtgcggcaacggcggcatgaagccgcgccacgccgagctgcttgcgtcggacctcgac
aaggccaccctggtgagctacatcgaccgcttcctcatgttctacagccgcacggcggac
cgcctgcagcgcaccagcacctggcgcgaaaacctggaaggcggcctggattacctcaag
caggtcgtcatcggcgacaagctcggcatcgccgccgaactggaagcggacatgcagcgc
gtggtcgacacctacgcctgcgaatggaaggaggccgtcaacaatcccgagacccgcaag
cgcttccgccatttcgtcaacagcgaggcgggcgacaacaatgtggtgttcatggaggag
cgcggccagatccgtccggccaccgtcgaagagcgcaagcgtattcccatcaaggtagcg
taa
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