Massilia endophytica: LSQ66_19915
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Entry
LSQ66_19915 CDS
T09693
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21825
AraC family transcriptional regulator, L-arginine-responsive activator
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meny03000
]
LSQ66_19915
Transcription factors [BR:
meny03000
]
Prokaryotic type
Helix-turn-helix
AraC family
LSQ66_19915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_23
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
UGQ46024
LinkDB
All DBs
Position
complement(4348838..4349779)
Genome browser
AA seq
313 aa
AA seq
DB search
MSFDELSRLAQEPTLHVLLVNAGEADSLGWSGLAQPLRLAQRLAGQRLQLDILTPSQAAA
DLSTQWHIALLAADEQQTPLAPQLSRALVERLRSADWWGGVGGAVLWLAEAGVLGGVRIA
LPWSLYSETEDITSRAILTPNIYALDGRHLSCCGGAASIDFSLTLIEALLGAGVQAEVKE
ALCIERVRGPEERQRVALQARFGALQPKLSEAVTLMEANIEEPLSTDDIAGLVGLSRRQL
ERLFKQYLGSLPSRYYLELRLQRARQLLRDTNHSIVQVGLMCGFSSGSHFSTAFGALFGN
TPREERQRKLASR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgacgaactctcccgcctggcccaggaacccacgctgcatgtcctgctggtg
aacgcgggcgaggcggacagcctgggctggtccggcctggcgcagcccctgcggctggcc
cagcgcctggcgggccagcgcctccagctcgacattctcacccccagccaggccgcggcc
gacctcagcacccagtggcacatcgccctgctggcggcggacgagcagcagacgcctttg
gctccccagctcagccgcgccctggtcgaacgcctgcgttcggcggactggtggggcggg
gtgggcggcgcggtgctgtggctcgccgaggcgggcgtgctgggcggcgtgcgcatcgcc
ctgccgtggtcgctgtactcggaaacggaagacatcacctcgcgcgccatcctcacgccc
aatatctacgccctggacggccgccacctcagctgctgcggcggcgccgccagcatcgac
ttcagcctgaccctgatcgaagccctgctgggcgccggagtgcaggccgaggtcaaggaa
gcgctctgcatcgagcgcgtgcgcggccccgaagagcggcagcgggtagcgctccaggcc
cgcttcggcgccttgcagcccaaactgtccgaggcggtaacgctaatggaagccaacatc
gaagagcccctgtcgacggacgacattgccgggctggtgggcctgtcgcgccgccagctg
gagcggctcttcaagcaatacctgggcagcctgccctcgcgctactacctcgagctgcgc
ctccagcgggcgcggcagctgctgcgcgacaccaaccattccattgtgcaagtgggcctc
atgtgcggcttcagctccggctcccacttctccaccgccttcggcgccctgttcggcaac
accccccgcgaagaacgccagcgcaagctcgcctcccgctaa
DBGET
integrated database retrieval system
