Massilia endophytica: LSQ66_21545
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Entry
LSQ66_21545 CDS
T09693
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meny03000
]
LSQ66_21545 (slmA)
03036 Chromosome and associated proteins [BR:
meny03036
]
LSQ66_21545 (slmA)
Transcription factors [BR:
meny03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
LSQ66_21545 (slmA)
Chromosome and associated proteins [BR:
meny03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
LSQ66_21545 (slmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
HTH_11
HTH_20
TetR_C_33
HTH_Tnp_1
HTH_5
HTH_23
FUR
HCV_NS2
Motif
Other DBs
NCBI-ProteinID:
UGQ46318
LinkDB
All DBs
Position
4699510..4700076
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AA seq
188 aa
AA seq
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MPTTPPGQRRLQILQALAAMLEHPKGEKITTAALARKLEVSEAALYRHFASKAQMFEGLI
EFIESSVFGLINQIAERQPDGLAQARDILTMLLQFAVNNPGMTRVMTGDALVNEDERLQL
RMNQFYDRVELALKQALRAASHVREEDVAARANLLASFVLGRWHRYAKSGFKADPAKDAG
LQIAILLG
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgacaccgcccggccaacgcaggctgcaaattctccaggcactggcagcgatg
ctggagcatcccaaaggggagaagatcaccactgcggccctggcccgcaagctggaggtg
tctgaagcagccctgtaccgccatttcgccagcaaggcgcagatgttcgaggggctgatc
gaattcatcgagtcgagcgtctttggcctgatcaaccagatcgccgagcgccagccggac
ggcctggcgcaggcgcgcgacattctcaccatgctgctgcaattcgccgtcaacaatccc
ggcatgacgcgcgtaatgacgggcgacgccctggtgaacgaggacgaacgcctgcagctg
cgcatgaaccagttctacgaccgcgttgagctggccctgaaacaggccctgcgcgccgcc
tcccatgtgcgcgaggaggatgtggccgcgcgcgccaatctgctggccagcttcgtcctg
ggacgctggcaccgctacgccaagagcggcttcaaggcggaccccgcaaaggacgcgggc
ctgcaaatcgccatcctgctgggctga
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