Massilia endophytica: LSQ66_22390
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Entry
LSQ66_22390 CDS
T09693
Name
(GenBank) GntR family transcriptional regulator
KO
K24967
GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meny03000
]
LSQ66_22390
Transcription factors [BR:
meny03000
]
Prokaryotic type
Helix-turn-helix
GntR family
LSQ66_22390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_36
HTH_11
HTH_DeoR
MarR
Fe_dep_repress
MarR_2
TrmB
Rrf2
HTH_Crp_2
HTH_20
RP-C
HTH_IclR
Ribosomal_S25
HTH_24
HTH_27
EAP30
DIP2311-like_C
HTH_29
CggR_N
DUF7342
HTH_41
Motif
Other DBs
NCBI-ProteinID:
UGQ46481
LinkDB
All DBs
Position
4866542..4867282
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AA seq
246 aa
AA seq
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MSHNSVEPSSEVSDNSPLYMQIARKLIDDVRTGRYQVDQALPSERTLSEQLNVSRVTARK
AIDQLVEQGLVVRRRGSGNYIAPRIEQPLSNLSSFSEQLQQRGYQPSSRWLKRAVVTAGT
EEQLSLGLSPNSKVARLERLRLADEMVMAYEVSVLPFSVVPRPEEIGDSLYKFLEASGKV
PARALQHIRAMNASAELARQLDVPEGQAVLFITRIAYLESGEAVELTHSYCRSDHYDFVA
EMRRGA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagccataacagcgtggagcccagcagcgaagttagcgataattcgccgctgtacatg
cagatagcgcggaaattgatcgacgacgtgcgtaccggacggtaccaggtcgatcaggcc
ctgccgtctgagcgcacgctgtcggaacagctcaatgtttcgcgcgtcacggcccgcaag
gccatcgaccagctggtcgagcagggcctggtggtgcgccgccgaggctcaggcaactat
attgccccgcgcatcgagcagcctctctccaacctctccagcttttccgagcagctgcag
cagcggggctaccagcccagctcgcgctggctcaagcgcgccgtcgtcacggcaggtacg
gaagagcagctgagcctgggcctttcgcccaacagcaaggtggcccgcctcgaacgcctg
cgcctggcggacgagatggtgatggcctacgaggtcagcgtgctgccgttttcggtggtg
ccgcggccggaagagatcggcgactcgctctacaaattcctggaagcctcgggcaaggtg
cccgcgcgcgccctgcagcatatccgcgccatgaatgcctcggccgagctggcccgccag
ctcgacgtgccggaaggccaggccgttctcttcattacccgcatcgcctacctggaaagc
ggcgaggcggtggagctcacgcactcctactgccgcagcgaccactacgacttcgtcgcc
gagatgcgccgcggcgcctga
DBGET
integrated database retrieval system
