Massilia endophytica: LSQ66_22735
Help
Entry
LSQ66_22735 CDS
T09693
Name
(GenBank) DEAD/DEAH box helicase
Organism
meny
Massilia endophytica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SNF2_assoc
Motif
Other DBs
NCBI-ProteinID:
UGQ46548
LinkDB
All DBs
Position
complement(4941202..4945353)
Genome browser
AA seq
1383 aa
AA seq
DB search
MSDPLLEFEALHASEKSILALLALVGEPMGRTAILDHIVKAGVTDAQGQPFTALTLDDPL
LKLERLALISLAVGRGYLCNARLRWPAIRAAIGGHMLESLCKAYEALTPMRQNWNGAYEP
RSYRHGVARLRMALLRSQNPQQVAPLLQACMVCYEAAQLHPIVDIFTRPFEPGMLMLVHP
LLQDDVLMLLLQHTQRDPALAAQVRGFAERHFQRRAAANQHVSDALRLALAEQAILCGNL
QDAGRYLEGLEGAMPQYLASAIRALRGDTNGAIAGFEGALKSIRRESGKRKHLFQGLGGH
LYVLSLLRNGDAKHLKSAESYLDLAVHAQANPDLPIHAMLSMLRQIRAGTMQTDVVLSRG
WESGMQPQLFQALLYYWLSLPQLKQRKAELQDLVQHAEAAGFQLIAGQAHGLLGHLGEEA
SATRAAALREQLGFSDMATWFERQEAWQRQLSALINLHQGPVDNGGEARLMWVVSYSPGH
GIVEIEPREQKRDARGQWGKGRPVALKRLREEAVQLDYLTPQDIRISSTIAPSRQAYSSG
LRYDIDTEQAALSLVGHPHVFWMDAPETRVELLAGQPELLIRSEGSQLRLTLVPAILDPN
CSVVVVKETPTRLRVVSVLEEHRRIAAIVGDGLLVPAHAEEQVLEAIGAVSSIVTVQSDI
GGGAANAEQVDADTRMHVHLLPYQQGLRMQVQVRPLRDAGPYYAPGEGAESVIADVGGRP
VQARRNLADERDRQRQLVLKCPVLEEAEQDHGEWLLGQPALALELLAELQALDDIVLAWP
DGEAFRLSKPVYTKQLKLNIKSKKDWFAVDGQLQLDEGKVMDLRTLLDLIEQSKSRFVQL
GDKQFLALSEELHRRLTDLQDFGSEDDAGMKVHRLAAFVLEELASEVSGVEADQMWREHL
ARIEALADYRPALPSTLRAELRDYQQAGFEWLARLAHWGVGACLADDMGLGKTLQTLALL
LTRAPQGPALVVAPTSVCLNWAAEAARFAPTLNVKMFGAGDRAETIGSAGPFDLVIVSYG
LLQLESERFVKQQWHTIVLDEAQAIKNAATKRSQAVMALRGGFRMAVTGTPLENHLGELW
NLFRFINPGLLGSLDQFNLRFAGPIERQQDAKAEVGARNRLRRLISPFILRRTKAQVLTE
LPARTEITLEVDLSADEAALYESLRRDALEKLAAIEGPADRKSMQILAEIMKLRRACCNP
NLVAPALGLRSSKLDAFSELLGGLLENRHKVLVFSQFVDHLSLIRVHLDAHGVSYQYLDG
ATPMAERKRRVDAFQAGEGDVFLISLKAGGVGINLTAADYVIHMDPWWNPAVEDQASDRA
HRMGQQRPVTIYRLVARRTIEEGIVDLHAHKRELADSLLDGSDTSARMSAEDMLAMLQEG
LRR
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcccctgctcgaattcgaggccctgcacgcctcggaaaagtccattctcgcc
ctgctcgccctggtcggcgagccgatggggcgcaccgccattctcgatcacatcgtcaag
gcgggcgtgacggatgcccagggccagcccttcaccgccctcacgctggacgacccgctg
ctcaagctggaacgcctcgcgctgatcagccttgccgtgggccgcggctatttgtgcaat
gcccgcctgcgctggcccgccatccgcgcggccatcggcgggcatatgctggagagcctg
tgcaaggcctacgaggcgctgacacccatgcgccagaactggaacggcgcctacgagccg
cgcagctaccggcacggcgtggcgcgcctgcgcatggcccttctgcgcagccagaacccg
cagcaggtggcgccgctgctgcaggcctgcatggtctgctacgaagcggcccagctgcat
cccattgtcgacatcttcacccgccccttcgagccgggcatgctgatgctcgtgcacccg
ctgctgcaggacgatgtgctcatgctcctgctccagcacacccagcgcgacccggcgctg
gcggcccaggtgcgcggcttcgccgaacgccacttccagcgccgcgcggcagcgaatcag
catgtgagcgatgcgctgcggcttgccctcgccgagcaggccatcctgtgcggcaacctg
caggacgcgggccgctatctggaagggctggaaggcgccatgccgcagtacctggcgagc
gccatccgggccctgcgcggcgacaccaatggcgccatcgcgggcttcgagggtgcgctg
aaatccatccgccgcgaatcgggcaagcgcaagcacctgttccagggcctgggtggccat
ctctatgtgctttccctgctgcgcaatggcgacgccaagcacctgaagtccgccgagagc
tatctcgatctcgcagtgcatgcgcaggccaatcccgacctgccgatacacgccatgctc
agcatgctgcgtcagatccgggcgggcaccatgcagacggacgtggtgctctcgcgcggc
tgggaaagcgggatgcagccgcagctgttccaggcgctgctctactactggctctcgctg
ccacagctgaagcagcgcaaggccgaactgcaggacctggtgcagcatgccgaagccgca
ggcttccagctgatcgctggccaggcccacggcctgctcggccacctgggcgaggaagcg
tcggccacgcgcgcggcggcgttacgcgagcagctgggcttcagcgacatggccacctgg
ttcgagcggcaggaagcctggcagcgccagctctcggccctgatcaatctccaccagggc
cccgtcgacaacggcggcgaagcgcgcctgatgtgggtggtgagctacagcccgggccac
ggcatcgtggagatcgagccgcgcgagcagaagcgcgacgcgcgcgggcagtggggcaag
ggccgtcccgtggcactcaagcgcctgcgcgaggaggccgtgcagctggactacctgaca
ccgcaggatatccgcatcagcagcaccatcgccccttcgcgccaggcctattcctccggc
ctgcgctacgacatcgatactgagcaggcggcgctgtcgctggtgggccacccccatgtg
ttctggatggatgcgccggaaacacgggtggaactgctggctgggcagcccgagctcctg
atccgcagcgaaggcagccagctgcgccttactttggtgcccgccatcctcgatcccaat
tgcagcgtggtggtggtgaaggaaacgccgacccgcctgcgcgtggtaagcgtgctggag
gaacaccgccgcattgccgccattgtgggcgatggcctgctcgtgcccgcccatgccgag
gaacaggtgctggaggcgataggcgccgtgtcctccatcgtcaccgtgcagtcggatatc
ggcggcggcgcggcgaacgcggagcaggtggatgcggatacccgcatgcacgtgcacctg
ctgccttaccagcagggcctgcgcatgcaggtgcaggtacggccgctgcgcgacgccggt
ccttactacgctcccggcgagggcgcggagagcgtgatcgcggacgtgggcggcaggccg
gtgcaggcacgccgcaacctggcggacgagcgtgaccggcagcgccagctggtgctgaaa
tgcccggtgctggaagaggcggaacaggaccacggtgaatggctgcttggccagcccgcg
ctggcgctggagttgctggccgagctgcaggcgctggacgatatcgtgctggcctggccc
gatggcgaggccttccgcctcagcaaaccggtgtacaccaagcagctcaagctgaacatc
aagagcaagaaggactggttcgccgtcgacggacaactgcagctggacgaaggcaaggtg
atggacctgcgcaccctgctggacctcatcgagcaaagcaagagccgcttcgtgcagctg
ggcgacaagcagttccttgccctgtccgaggagctgcaccgccgcctcaccgacctgcag
gacttcggcagcgaagacgacgcgggcatgaaggtgcatcgcctcgcggccttcgtgctg
gaagagctggcgtccgaagtgagcggggtggaagcggaccagatgtggcgcgagcatctc
gcgcgcatcgaagcgctggccgactatcggcccgcgctgccgagcacactgcgggcggag
ctgcgcgactaccagcaggcgggcttcgaatggctggcccgcctggcccactggggcgtg
ggcgcctgcctcgccgacgacatgggcctgggcaaaacgctccagaccctggccctgctg
ctcacgcgcgcgccgcaaggccccgcgctggtggtggcgccaacctcggtctgcctgaac
tgggcggcggaagcggcccgcttcgcgccaaccctgaacgtgaagatgttcggcgcgggc
gaccgcgcggagaccatcggcagcgccggccctttcgacctcgtgatcgtgagctatggc
ctgctgcagctggagtccgaacgcttcgtgaagcagcagtggcacaccatcgtgctggac
gaggcgcaggccatcaagaacgccgccaccaagcgctcgcaggccgtgatggcgctgcgc
ggcggcttccgcatggccgtcaccggcacgccgctggaaaaccacctgggcgagctgtgg
aacctgttccgcttcatcaatccgggcctgcttggatcgctggaccagttcaacctgcgc
ttcgcaggccccatcgagcgccagcaggacgcgaaggccgaagtgggtgcgcgcaaccgc
ctgcgccgcctgataagccccttcatcctgcgccgcaccaaggcccaggtgctcaccgag
ctgcctgcccgcaccgagatcacgctggaagtggatctctcggccgacgaggcggcgctg
tatgaatcgctgcggcgcgatgcgctggagaagctggccgccatcgaaggcccggccgac
cgcaagtccatgcagatcctggccgagatcatgaagctgcgccgggcctgctgcaatccg
aacctggtggcgccggcgctcggcctgcgcagcagcaagctcgatgccttctcggagctg
ctcggcggcctgctggagaaccggcacaaggtgctcgtgttcagccagttcgtcgaccac
ttgtccctgatccgcgtgcacctggacgcgcacggcgtgagctaccagtatctcgacggc
gccacgcccatggcggagcgcaagcgccgcgtggacgccttccaggctggcgagggcgac
gtcttcctcatcagcctgaaggcgggcggcgtcggcatcaacctcacggcggccgactac
gtgatccacatggacccgtggtggaaccccgccgtggaagaccaggcctcggaccgcgcc
caccgcatgggccagcagcgccccgtcaccatctaccgcctggtggcgcgccgcaccatc
gaggaaggcatcgtggacctgcatgcgcacaagcgcgagctggccgacagcctgctcgac
ggcagcgacacctcggcccgcatgagcgcggaggacatgctggccatgctgcaggaaggc
ctgcgccgttaa
DBGET
integrated database retrieval system
