Massilia endophytica: LSQ66_22960
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Entry
LSQ66_22960 CDS
T09693
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
meny
Massilia endophytica
Pathway
meny02010
ABC transporters
meny03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LSQ66_22960
03070 Bacterial secretion system
LSQ66_22960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_22960
02044 Secretion system [BR:
meny02044
]
LSQ66_22960
Transporters [BR:
meny02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LSQ66_22960
Secretion system [BR:
meny02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LSQ66_22960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_21
Zeta_toxin
AAA_22
AAA_16
NB-ARC
SbcC_Walker_B
AAA_30
AAA_29
nSTAND3
MobB
Motif
Other DBs
NCBI-ProteinID:
UGQ46591
LinkDB
All DBs
Position
5006389..5008518
Genome browser
AA seq
709 aa
AA seq
DB search
MQANFPHTAVQCLTAIAQHHGLQINPERLIDDYALGAEEPGNNLLLRMAGDIGMKAKVGR
LSWEGLRKQGGVFPLMARLRNGHMVIVAGLGDNEQVAVLDPQQGGLAMEAREAFCARWEG
EVLFVRRQHKLSDPNQPFGLRWFIPEILKQKTAYRDIFIAAVAIQVLSLASPMFFQLVID
KVLTHQSVTTLWVLTVGVVIALGFEAALGYVRQMLTIAASNKIDMRLTRRTFAHLLSLPI
DYFESSTAGIIARHMQQLDRIRNFLTGRLFMTALDLISLVVFIPILFSYSVLLATLVLVF
AALIGGIVMAMVPTFQRRLHAMYAAEGQRQAMLVETIHGMRTVKALAIEPSQRRIWDQRS
AEAVTMHYRVGKLGLTGNAITDFLSKLLPVLIIVLGAQSVFDQTMTIGALIAFQMLSQRV
TNPLISVVGLVNEYQETALSVRMLGEVMNRAPEGRSGAGGLRPVLQGEIRFEDVTFRYPG
SPNTALDRTSFTIKPGTVVGIVGRSGSGKTTLTKVIQGLYAVQEGIVRFDGTDAREIELP
HLRRQIGVVLQENFLFRGTVRENLTVTKPDATFEEIAAAAAAAGADEFIERLPQGYDTLL
EENASNLSGGQKQRLSIARSLLAKPRILILDEAASALDPESEAIFINNLSKIAVGRTVVM
ISHRLSTLVNADAILVMQRGRLVDAGTHKELLERSDTYQHLWNQQTSHL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgaactttccccacacggcagtgcaatgcctgactgccatcgcgcagcaccac
ggtctgcagatcaacccggaacgcctgatcgacgactacgccctcggcgcggaagagccc
ggtaacaacctgctgctgcgcatggcgggcgacatcggcatgaaggccaaggtcggccgc
ctgagctgggagggcctgcgcaagcagggcggcgtcttccccctcatggcgcgcctgcgc
aacgggcacatggtcatcgtggccggcctgggcgacaacgagcaggtggccgtgctggac
ccgcagcagggcggcctggccatggaagcgcgcgaggccttctgcgcgcgctgggagggc
gaggtgctgttcgtgcggcgccagcacaagctgagcgaccccaaccagcctttcggcctg
cgctggttcattcccgagattctcaagcagaagacggcctaccgcgacatcttcatcgcc
gccgtggcgatccaggtgctgtccctggcctcgcccatgttcttccagctggtgatcgat
aaggtgctgacccaccagagcgtgaccacgctgtgggtgctgacggtgggcgtggtgatc
gcgctcggcttcgaggcggccctgggctatgtgcggcagatgctcaccatcgccgcctcc
aacaagatcgacatgcgcctgacccggcgcaccttcgctcacctgctgagcttgccgatc
gactacttcgagagcagcacggccggcatcatcgcccgccacatgcagcagctcgaccgc
atccgcaacttcctcacgggccgcctcttcatgacggccctggacctgatctccctggtg
gtcttcatccctatcctgttctcctattcggtgctgctggccacgctcgtgctggtgttc
gcggccctgatcggcggcatcgtgatggccatggtgcccaccttccagcgccgcctgcac
gccatgtacgcagccgaaggccagcgccaggccatgctggtggaaaccatccacggcatg
cgcacggtgaaggccctggccatcgagcccagccagcgccgcatctgggaccagcgctcg
gccgaggcggtcaccatgcactaccgggtgggcaagctgggcctgacgggcaatgccatc
acggacttcctcagcaagctgctgcccgtgctcatcatcgtgctcggcgcccagtccgtg
ttcgaccagaccatgaccatcggcgccctgatcgccttccagatgctgtcccagcgcgtc
accaaccccctgatttccgtggtgggcctggtcaacgaataccaggaaacggcgctctcc
gtgcgcatgctgggcgaggtgatgaaccgcgcgccggaagggcgcagcggggcgggcggc
ctgcgccccgtgctgcagggcgagatccgcttcgaggacgtaaccttccgctaccccggc
tcgcccaacacggccctggaccgcaccagcttcaccatcaagcccggcaccgtggtcggc
atcgtgggccgcagcggctcgggcaagaccaccctgaccaaggtcatccagggcctctac
gccgtacaggaaggcatcgtgcgcttcgacggaacggacgcgcgcgagatcgagctgccc
cacctgcggcgccagatcggcgtcgtgctgcaggagaacttcctcttccgcggcaccgtg
cgcgagaatctcaccgtcaccaagccggacgccaccttcgaggagatcgccgccgcggcc
gcggccgcgggcgcggacgaattcatcgagcgcctgccgcagggctacgacaccctgctc
gaagagaacgcctccaacctgtccggcggccagaagcagcgcctgtccatcgcgcgctcc
ctgctggccaagccccgcatcctcatcctggacgaagcggccagcgccctcgatccggag
agcgaagccatcttcatcaacaacctgtcgaaaattgccgtgggccgcaccgtggtgatg
atctcgcaccgcctctccaccctggtcaatgccgacgccatcctcgtgatgcagcgcggc
cgcctggtggacgccggcacccacaaagagctgctggagcgcagcgacacctatcagcac
ctatggaaccaacaaacaagccatctgtga
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