Massilia endophytica: LSQ66_23235
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Entry
LSQ66_23235 CDS
T09693
Symbol
dnaA
Name
(GenBank) chromosomal replication initiator protein DnaA
KO
K02313
chromosomal replication initiator protein
Organism
meny
Massilia endophytica
Pathway
meny02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LSQ66_23235 (dnaA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meny03032
]
LSQ66_23235 (dnaA)
03036 Chromosome and associated proteins [BR:
meny03036
]
LSQ66_23235 (dnaA)
DNA replication proteins [BR:
meny03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LSQ66_23235 (dnaA)
Chromosome and associated proteins [BR:
meny03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
LSQ66_23235 (dnaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DnaA
Bac_DnaA_C
DnaA_N
IstB_IS21
Hda_lid
AAA
ATPase_2
Arg_tRNA_synt_N
AFG1_ATPase
NotI
RNA_helicase
AFP_2
Motif
Other DBs
NCBI-ProteinID:
UGQ46645
LinkDB
All DBs
Position
complement(5066616..5068022)
Genome browser
AA seq
468 aa
AA seq
DB search
MDNFWQTCSAQLELELTPQQFSAWIKPLVPLDYENGKLRIAAPNRFKLDWVKTQFASRIT
ALASQYWEAPTEVQFVLDPRTNPAKKPAAPAANGVAAPAVHTPESRAGDMPPSAAATAGN
EYANSRGREQSRINTDLTFESFVTGKANQLARAAAIQVANNPGVSYNPLFFYGGVGLGKT
HLIHAIGNQVMADQPGARIRYIHAEQYVRDVVTAYQRKGFDDFKHYYHSLDMLLIDDIQF
FGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEITGMDDRLISRFDSGLTVAIEPPEL
EMRVAILLKKAKSEGVTLSDDVAFFVAKHLRSNVRELEGALRKILAYSRFHGKDISIDIV
KEALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKRRPANIARPRQIAMYLAKELTQ
KSLPEIGELFGGRDHTTVLHAVRKIAQDRTKNPECNHELHVLEQTLKG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggataatttctggcagacctgttccgcccaactggaacttgagctgacgccgcagcaa
ttcagcgcgtggataaaaccgctcgtgccgctcgattatgagaatggcaagttgcgcatc
gcggcacccaaccgtttcaagctcgattgggtcaagacgcagttcgccagccggattacc
gccctcgcctcgcaatactgggaagcgcccaccgaggtgcagttcgtgctcgacccgcgc
accaacccggccaagaagccggctgcccctgccgccaacggcgtggcggcgcccgccgtg
cacacccccgaatcccgcgcgggcgacatgccgccttcggccgccgctacggcggggaac
gaatacgccaactcgcgcggccgggagcagagccgcatcaacacggacctgaccttcgag
agcttcgtgacgggtaaggccaaccagctggcgcgcgccgccgcgatccaggtggcgaac
aaccccggcgtgtcctacaaccccctgttcttctacggcggcgttggcctgggcaagacc
cacctgattcacgccatcggcaaccaggtgatggccgaccagccgggcgcgcgcatccgc
tatatccacgccgagcagtatgtgcgcgacgtggtgacggcctaccagcgcaagggcttc
gacgatttcaagcattactaccactcgctggacatgctgctgatcgacgatatccagttc
ttcggcgggaagagccgcacccaggaagagttcttctacgccttcgaagcgcttatcgcg
gccaagaagcagatcatcatcaccagcgacacgtatcccaaagagatcacgggcatggac
gaccgcctgatctcgcgcttcgactcgggcctgacggtggccatcgagccgccggagctg
gagatgcgcgtggccattctgctgaagaaggcgaaatcggaaggcgtgaccctgtccgac
gacgtggcattcttcgtggccaagcacctgcgctcgaacgtgcgcgaactggaaggcgcc
ctgcgcaagatcctggcctactcgcgcttccacggcaaggacatctccatcgacatcgtg
aaggaagcgctgaaggacctgctctcggtgcagaaccgccagatcagcgtggagaacatc
cagaagacggtggcggacttcttcaacatcaaggtggcggacatgtattcgaagcgccgc
ccggccaatatcgcccgcccgcgccagatcgccatgtacctggccaaggagctcacgcaa
aagagcctgccggagatcggcgagctgtttggcggccgcgatcacaccaccgtgctgcac
gccgtgcgcaagatcgcccaggaccgtaccaagaacccggaatgcaaccacgagctgcat
gtgctggagcagaccctgaaaggctga
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