Massilia endophytica: LSQ66_23980
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Entry
LSQ66_23980 CDS
T09693
Symbol
mutY
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
meny
Massilia endophytica
Pathway
meny03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LSQ66_23980 (mutY)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meny03400
]
LSQ66_23980 (mutY)
Enzymes [BR:
meny01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
LSQ66_23980 (mutY)
DNA repair and recombination proteins [BR:
meny03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LSQ66_23980 (mutY)
Prokaryotic type
LSQ66_23980 (mutY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
UGQ46783
LinkDB
All DBs
Position
complement(5231325..5232446)
Genome browser
AA seq
373 aa
AA seq
DB search
MQYEDFADPSFSADLIGWQKQHGRHALPWQNTRDAYRIWLSEIMLQQTQVSAVLGYYGRF
LERFPTLHDLAAAPVEDVMAQWSGLGYYTRARNLHKCAQRVVAEYGGVFPSDPALLAELP
GIGRSTAAAIAAFSAGARAAIMDGNVKRVFARVFGIDSYPGERKTEEAMWRRAEALLPQE
GIESYTQGLMDMGATLCTRSSPDCTRCPMQPRCVAFATNRVKDLPVRKPKKATPEKHALL
LLMVHRDQVLLEQRPASGIWGGLLSLPELYGHAAAEGDTAPEIDQLAAAQAVQQFGTVES
QEQLLPVTHVFTHYKLHMTPLLITLAGRAPLAANERYQWLSVDRIAAAALPAPIKKLLLD
LLGHRAEAQARMF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgcagtacgaagactttgcagaccccagcttctcggccgacctgatcggctggcagaaa
cagcacggacgccacgccctgccgtggcagaacacccgcgacgcctaccgcatctggctt
tccgagatcatgctgcagcagacgcaggtctcggcggtgctgggctactacgggcgcttc
ctcgaacgcttccccaccctgcacgacctggccgccgcgccggtggaggacgtgatggcg
cagtggtcgggcctcggctactacacgcgggcgcgcaacctgcacaagtgcgcgcagcgg
gtggtggcggagtacggcggcgtcttcccttccgatcccgcgctgctggcggagctgccg
ggcattggccgttcgacggcagcggcgatcgccgccttctcggcgggtgcgcgcgccgcc
atcatggatggcaacgtgaagcgcgtgtttgcccgcgtgttcgggatcgacagctatccc
ggcgaacggaagacggaagaagccatgtggcggcgtgcggaagccctgctgccgcaggaa
ggcatcgaatcgtacactcaggggctgatggatatgggggcgacgctatgcacgcgcagc
tcgccggattgcacgcgctgccccatgcagccgcgctgcgtggccttcgccactaaccgc
gtgaaggatctgccggtgcgcaagccgaagaaggcgacgccggagaaacatgccttgctg
ctgctaatggtgcatcgggaccaggtgctgctggagcagcggccggccagcggcatctgg
ggcggcctgctctcactgccagagctctatggccatgccgcggcggaaggcgacacggcg
ccggaaatcgatcagcttgcagcagcacaggcggtgcagcagttcggcacggtggaatct
caggagcagctgctgccggtgacgcatgtgttcacgcactacaaactgcacatgacgccg
ctgctgatcacgctggccggccgcgcgccgctggcggccaatgaacgctaccagtggctc
agtgtggaccgcatcgccgccgccgccctgccagctcccatcaagaagctcctgctcgac
ctgctcggccaccgcgccgaagcgcaggcgcggatgttctag
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