Massilia endophytica: LSQ66_24100 Help Entry LSQ66_24100       CDS       T09693                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism meny  Massilia endophytica Pathway meny02020   Two-component system meny02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:meny00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     LSQ66_24100  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     LSQ66_24100  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:meny03021]     LSQ66_24100 Transcription machinery [BR:meny03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      LSQ66_24100 BRITE hierarchy Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_IclR Xre-like-HTH HTH_Crp_2 HTH_23 Motif Other DBs NCBI-ProteinID:  UGQ46805 LinkDB All DBs Position 5254173..5255642 Genome browser AA seq 489 aa AA seqDB search MKQSLQLRTSQHLALTPQLQQSIRLLQLSTLELHQELEQLLTENPLLERLDDPLDRSVRL LADGAIGQSAPAATPAEGPPGENGPQAEAAPAEAEPYEGDSVAEGDSDWSGSGSGKAPDD EDARPQLEASHHSLRDHLLEQMRVTVQEPRDRALMELIIDALDDNGYLEESLEEIHARIP EEADVELEELQTALTLLQSFDPVGVGARNASECLAIQIRRMPHIPLVTRRMALCIVEKHL TWFAQRDFNKLKKALDCDEEDLREAQAVIRRCNPHPGAAFAQDASDYVVPDVIVKKGRNG WVVTLNNDVMPRLRVNALYASLLKQGKGETQMNAQLQEAKWLIKNMRQRFDTILRVAQAI VERQKNFFSHGAVAMRPLVLREIADTLGLHESTISRVTTQKYMLTPHGMFELKYFFGSHV ATEAGGEASSTAIRALIVQFTGAEDPKNPLSDSKIADMLGEQGMVIARRTVAKYREALKI PPVSLRKSL NT seq 1470 nt NT seq  +upstreamnt  +downstreamnt atgaaacaatccctgcaactgcgaacgtcgcagcatcttgcgttgacgccgcaattgcag cagtccatccggctgctgcaattgtccacgcttgagctgcatcaggagctggagcagctg ctaaccgaaaaccccctgctcgaacgtctggacgacccgctggaccgcagcgtgcgcctt ctcgccgacggcgccatcggccagagcgcgccggcggccacgccagccgaaggaccgccc ggcgagaacgggccgcaggccgaggccgcgcctgcggaagccgaaccctacgaaggcgac agcgtggccgagggcgacagcgactggtcgggttcgggcagcggcaaggccccggacgac gaggacgcgcgcccgcagctggaagcgagccaccacagcctgcgcgaccatctgctggag cagatgcgcgtcaccgtgcaggagccgcgcgaccgggcgctgatggaactcatcatcgat gcgctggacgacaacggctatcttgaagaaagcctcgaggaaatccacgcgcgcattccg gaagaggcggatgtggagctggaggagctgcagacggcgctcacgctgctgcaaagcttc gaccccgtgggcgtgggcgcgcgcaacgcgtccgaatgcctcgccatccagatcaggcgc atgccgcacattccactggtcacgcgccgcatggccttgtgcatcgtggaaaaacacctc acctggttcgcccagcgcgacttcaacaagctgaagaaagcgctcgattgcgacgaggaa gatctgcgcgaagcccaggccgtgatccgccgctgcaacccgcatccgggcgccgccttc gcgcaggatgcgtcagactatgtcgtgccggacgtgatcgtgaagaagggccgcaacggc tgggtcgtcacgctgaacaacgacgtgatgccgcgcctgcgcgtcaatgcgctgtatgcc agtttgctcaagcagggcaagggcgaaacgcagatgaatgcgcagctgcaggaggccaag tggctcatcaagaacatgcgccagcggtttgacacaattttgcgcgttgcacaagcaatc gtggagcggcagaagaactttttctcgcacggcgccgtcgccatgagaccccttgtgttg cgcgaaattgctgatacactgggtttacacgagagtactatttctcgcgtaacaactcag aaatacatgctcaccccacatgggatgtttgagttgaaatatttctttggtagccacgtc gcgactgaagctgggggtgaagcttcctcgaccgcgatccgtgcgctgattgtgcaattc acaggagcagaagacccgaaaaatcccttatccgacagtaagattgcggacatgctagga gaacagggcatggtgattgcgcgacgtactgttgccaagtatcgcgaagccttgaagatc cctcccgtcagcctccgcaagtccttgtag

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