KEGG   Massilia endophytica: LSQ66_24135
Entry
LSQ66_24135       CDS       T09693                                 
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
meny  Massilia endophytica
Brite
KEGG Orthology (KO) [BR:meny00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:meny03019]
    LSQ66_24135 (rapZ)
Messenger RNA biogenesis [BR:meny03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     LSQ66_24135 (rapZ)
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_16 AAA_18 AAA_22 CoaE FtsK_SpoIIIE AAA_29 adh_short
Other DBs
NCBI-ProteinID: UGQ46812
LinkDB
Position
complement(5259918..5260781)
AA seq 287 aa
MRIVLITGISGSGKSVALNVLEDTGFYCVDNLPPALLANLVSTLCEEGTQMLAVAVDARS
AASLTSLPADIQKLKELGHDVKVMFLTANTHSLVARFSETRRSHPLSHELRPGQNPAGRR
TLIECIQEERERLSAIEQLGHVIDTSELSANKLRGWVKDLVQSENAPLTLFFESFAFKLG
VPLDADFVFDVRAIPNPYYDLDLRPLTGRDAPVIAFLDAQPTAEEMFRDIRAFIEKWLPS
FKTDNRSYLTVAIGCTGGQHRSVYMAERLAKYFHANERVVLRHREQS
NT seq 864 nt   +upstreamnt  +downstreamnt
atgcgcatcgttctcattactggcatttccggctccggcaagtccgtcgcactgaacgtc
ctcgaagatacgggcttctactgcgtggacaatctgccgcccgcattgctggccaatctt
gtttccaccttgtgcgaagaaggcacgcagatgcttgccgtggcggtggacgcgcgcagc
gcggcttcgctgaccagcctgcctgccgatatccagaagctcaaggagctggggcatgac
gtcaaggtcatgttcctgaccgcgaacacgcattccctcgtcgcgcgcttttccgaaaca
cgccgcagccacccgctttcgcatgaactgcgtcccggccagaacccggccgggcgccgc
accctgatcgagtgcatccaggaagagcgcgaacgcctctcggccatcgagcagcttggc
cacgtgatcgatacttcggaactgagcgcgaacaagctgcgcggatgggtgaaggacctg
gtgcagagcgagaacgcgccgctgacgctcttcttcgagtcctttgccttcaagctgggc
gtgccgctggacgccgacttcgtgttcgacgtgcgcgccatcccgaatccctactacgat
ctggacctgcgcccattgacgggacgggacgcgcccgtgatcgccttcctcgacgcccag
ccgacagcggaagagatgttccgcgatatccgcgccttcatcgagaagtggctgccttca
ttcaagaccgataaccgcagctacctgacggtggccatcggctgcaccggcggccagcac
cgctcggtgtacatggccgagcgcctggcgaagtacttccacgccaacgagcgcgtcgta
ctgcgccaccgcgaacagtcctaa

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