Massilia endophytica: LSQ66_24460
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Entry
LSQ66_24460 CDS
T09693
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_24460
Transporters [BR:
meny02000
]
Other transporters
Pores ion channels [TC:
1
]
LSQ66_24460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF748
Motif
Other DBs
NCBI-ProteinID:
UGQ46874
LinkDB
All DBs
Position
complement(5337187..5341584)
Genome browser
AA seq
1465 aa
AA seq
DB search
MAEENDTPAPPPPVRRWPRRVAIGFGITALLLGGAVWLLGRETTLQQIVRQVERSSGGQI
TITGVHGSLYGRMHLDRLVFRSPDSVTTAENIDIDWSPLQYLSQGVAVSELHVASTVMQT
LRKSPPPTMPASIAPPFRLSIADAKLTRLVMIDETGQRTQIDNTALKLYGDSRQWQVKDA
SASTPLGRITANATVGAKPPFRVDGTATLSQAAAAPGRPAAELTASASGSFELLAIAVKG
KSSNATGDGVLTLAPFDPIILRTLDLRAHGVDPSRFNSTWPSASLELAARAEIGQGQRVS
GSLSVVNTGATGPLDRQRIPLRAVNARLGGTLTVASIEDVMIDLGAAGSLAGSGSIHRSA
PDGGIETADFRLHTSRIDLHEIHGSAKPTAIAGEIAASSQGKAQRFNARLADKGLRLDAL
ATLEDSMLHVSQARLSAGRGVVAFTGQASLKDDKAFKAAASISHFDPSALGKYPAADLNA
DVRAGGRLAPELQASAEFTIRPSRFMDQALTGSGKLNADAKHLSGIDVKLAFGANTAQAN
GSFGLPGDRLSWRADAKNLAALGSGLRGALSAGGVATGGYAAPRSSFDATARGLSLGDAK
ARGEDSVLSMKGEVGLAGPQKNVELTASGSASRFNPAAFGAPQPGSIGAEFSVSGRLAED
WRGKLDVKLLPSTFSGAPLSGYARVAANSRHVESADVNLQLGQNTLQANGGFGAVNDRLD
WKLDAPQLSNLGPGFGGVLRGSGTLSGTAGKPAIAFSMDGSNLRLMTDHQIRAIRASANL
GAGQGAADAVVSDVDLTGYSSPTTSIERARLQTTGNRAAHTVQLSAVGKDFDAALRLRGG
MTGDTWTGAIESLQNKGRFALALQAPAPLRLTGAAGKGVLGLARPVQLSLTNAALALSEG
VLRIETLEKNGPRWRSRGAAAGVNASYLAQFSDAWRDNVVSDLTLAANWGIELTVPAVEG
VAPAIDGSLSVFREKGDITVTGGEHPIPLGLSQLEARVNVAGDVLRVQTALNGSRSGQAK
LEAAAHLENGRIPKNSPLAISGNVDIPSIAWLSPLAGVRGLELDGALRAAFSGNGTVGEP
VLNGDVKGERLSVNWPEQALKLRNGRLAARVDGDRLQLQQLHFEGQQGVMEADGWMRLAN
AEAAMELKLVADKLEVLSSPDRILVLSGRSTLVRDAKHFQLDGKFRADRAAIELPSLDTP
TISDDVVILGRTKPSVKSAAAAMPLNVDVEADLGDDFYLKGKGLDAQLAGAVQVRITDRR
PPRVNGSIRVVSGTYAAYGQKLAIERGVINFTGAYDNPGLNIRAMRKRPEGEQLSDTNVE
AGVEVRGTAQAPVAKLVSTPSVPDSEKLSWLVLGHGLSDMAGNEMGLLGTAAGALFGGKG
GGSLANKVGLDELGVSQTKGLEGLEGTVVTVGKKLSSRAYLSFEQGAGTATSLVKLRYKL
TPRITLQFQTGTNNALDVLYTWAFD
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaaaacgacacccctgccccgccgcctccggtgcggcgctggccgcgccgc
gttgccatcggcttcggcatcaccgccctgctgctcggcggcgccgtgtggctgctggga
cgcgagaccacgctgcagcagatcgtgcggcaagtggagcgttcgagcggcggccagatc
accatcaccggcgtgcacggctcgctgtacggccgcatgcatctggaccgtttggttttc
cgcagcccggacagcgtgaccacggccgagaacatcgacatcgactggtcgccgctgcaa
tacctttcccagggcgtggcggtcagcgaactgcatgtggccagcacggtgatgcagacc
ctgcgcaagtcgcccccgcccacgatgccggcgtcgatcgcgccacccttccgcctcagc
attgccgatgcaaagctcacgcgcctcgtcatgatcgatgaaacgggccagcgcacgcag
atcgacaacacggcgctgaaactgtatggcgacagcaggcaatggcaggtgaaggacgcc
agcgcatcgacgcctctgggccgcattaccgccaacgccacggtgggcgcgaagccgccc
ttccgtgtggacggcacggccacgctgtcacaggcggctgccgcgccgggacgccccgcc
gcggaactcaccgcctccgccagcggcagcttcgagctgctggccatcgccgtcaagggc
aagtcctccaatgccaccggcgatggcgtactgacgctcgcgccattcgatccgatcatc
ctgcgcacgctggacctgcgggcgcacggcgtcgatccttcgcgcttcaacagtacatgg
ccttccgccagccttgaactggcggcacgcgccgaaatcggccaggggcagcgcgtcagt
ggctcgctctccgtggtcaacaccggtgccacgggaccgctcgaccggcagcgcattccg
ctgcgcgccgtcaacgcgcggctgggcggcacgctcactgtggcttccatcgaagatgtg
atgatcgatctcggcgccgcaggcagcctggcgggcagcggaagcattcaccgctccgca
ccggacggcggcatcgaaactgcggacttccggctgcatacctcgcgcatcgacctccac
gaaatccacggcagcgcgaagcccaccgccatcgcgggcgagatcgccgcaagcagccag
ggaaaggcacagcgtttcaacgcccgcctggcggacaagggcctgaggctcgacgccctg
gccaccctggaggactcgatgctgcacgtgagccaggcgcgcctctcggcgggcagaggc
gtcgttgccttcaccggacaagccagcctgaaagacgacaaggccttcaaggccgccgcc
agcatcagccacttcgatccttcagcgctcggcaagtatcctgcggcggacctgaacgcc
gacgtgcgggcgggcggcaggctggcgcctgaactgcaggcctcagccgaattcaccatc
cggccgagccgcttcatggaccaggcgcttacaggcagcggcaaactcaatgccgacgcg
aagcacctgagcggcatcgacgtgaagctcgccttcggcgccaacacggcgcaagcaaac
ggcagcttcggcctgcccggggaccgcctgagctggagggctgacgccaaaaacctcgcc
gcgctgggcagcggcctgcgcggagcgctcagtgcgggcggcgttgcaaccggcggctat
gcggcgccacgcagcagtttcgacgcaacggcgcgcggcctctcgcttggcgacgccaag
gcgcgcggcgaggacagcgtgctgtcgatgaaaggcgaagtcgggctggccggaccgcag
aaaaacgtggagctcacagccagcggcagcgccagccgcttcaatcccgccgctttcggt
gcgccgcagcctggcagtataggcgccgagttcagcgtgagcggcaggctcgccgaagac
tggcgcggcaaactggatgtaaagcttctgccctcaaccttctccggcgcgccgctctca
gggtatgccagggtggccgccaacagcaggcatgtggaaagcgcggatgtgaacctgcag
ctggggcagaacaccctgcaggcaaacggcggctttggcgccgtgaacgaccgcctcgac
tggaagctggatgcgccgcagctctccaatctgggcccgggcttcggcggcgtgctgcgc
ggcagcggcaccctgagcggcacggccggcaagcccgcaatcgccttcagcatggatggc
agcaacctgcgcctgatgacggaccaccagatccgcgccatccgcgccagcgccaacctg
ggcgcaggccagggagcggccgacgccgtggtaagcgatgtggacctgaccggctacagc
tcgcccaccaccagtatcgaacgcgcgcggctccagaccacgggcaaccgcgccgcgcac
acggttcagctgagcgccgtgggcaaggacttcgatgccgccctgcgcctgcgcggcggc
atgactggcgatacctggaccggcgccatcgaatcgcttcagaacaaggggcggttcgcc
ctcgcgctccaggctccggccccgctgcggctgacgggcgccgcaggcaagggcgtgctg
ggtctcgcacggcccgtgcagctctcgctcaccaacgccgccctggcactctccgagggt
gtcctccgcatcgaaacgctggagaagaacggcccgcgctggcgtagccggggtgcggcc
gctggcgttaacgccagctatctcgcccagttctccgacgcctggcgcgacaatgtggtg
agcgacctgacgctggccgcgaactggggcatcgaactcactgtacctgcggtggagggt
gtggcgccggccatcgacggttcgctcagcgtgttccgcgagaagggcgacatcacggtg
acgggcggcgaacacccgattccgctgggcctgagccagctcgaagcgcgcgtgaacgtg
gcgggcgacgtgctgcgcgtgcagacggcgctgaacggcagccgctccggccaggcgaaa
ctggaagcggcggcgcatcttgaaaatggccgcattccgaaaaacagtcccctcgccatc
agcggcaatgtggatatcccgtccatagcctggctctcgcccctggcgggcgttcgggga
ctggaactggatggcgccctgcgcgccgccttcagcggcaacggcaccgtgggcgagccg
gtgctgaatggcgacgtgaaaggcgaacggctttcggtcaactggccggagcaggccttg
aagctgcgcaacggccgcctggcagcgcgggtcgatggcgaccggctgcagctgcagcag
ctgcacttcgaaggccagcagggcgtgatggaggccgatggatggatgcggctggcgaac
gcggaagcggcgatggagctgaagctggtggcggacaagctggaagtgctctccagcccg
gaccgcattctcgtgctgagcggccgcagcacgctggtgcgcgacgcgaagcacttccag
ctggacggcaagttccgcgccgaccgcgccgccatcgaactgccctcgctcgacacgccg
accatcagcgacgacgtggtcatcctcggcaggacaaagcccagcgtgaaatcggccgct
gccgccatgccgctgaacgtggatgtggaagccgacctcggcgacgacttctacctgaaa
ggaaagggcctggacgcgcagctggcaggcgcggtgcaggtgcgcatcacggaccgccgg
ccgccgcgcgtgaacggcagcatccgcgtggtgagcgggacctacgccgcgtatggacag
aagctggccatcgaacgcggcgtgatcaacttcaccggcgcctacgacaaccccggcctg
aatatccgcgccatgcgcaagcggccggaaggcgagcagctcagcgacaccaatgtggag
gcgggcgtcgaggtgcgcggcacggcgcaggcgccggtggcgaagctggtgtccacgccg
agcgtgccggacagcgaaaagctctcctggctggtgctggggcatggcctctccgacatg
gcgggcaacgagatgggactgctgggcaccgccgcgggcgccctcttcggcggcaagggc
ggcggcagcctggccaacaaggtcgggctggacgagctgggcgtatcgcagaccaaggga
ctggaagggctggaaggtacggtggtcaccgtgggcaagaagctctcctcgcgggcctac
ctcagtttcgagcagggcgcgggcacggcaaccagcctcgtgaagctgcgctacaagctc
acgccgcgcatcacgctccagttccagacgggaacgaacaacgcgctcgacgtgctctac
acctgggccttcgactga
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