Candidatus Moranella endobia PCVAL: MPC_061
Help
Entry
MPC_061 CDS
T02613
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
meo
Candidatus Moranella endobia PCVAL
Brite
KEGG Orthology (KO) [BR:
meo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MPC_061 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meo03021
]
MPC_061 (rpoD)
Transcription machinery [BR:
meo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MPC_061 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DnaD_N
Sas-6-like_oligomerization
Motif
Other DBs
NCBI-ProteinID:
AGJ61122
LinkDB
All DBs
Position
complement(77531..79366)
Genome browser
AA seq
611 aa
AA seq
DB search
MEQNQQSQLKLLVTHGKEQGYLTFAEVNDHLPDDIVDSDQIEDIIQMINDMGIRVMEEAP
DADDLLLLADTNPDTDEDAVEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEI
DIAKRIEDGINQVQCSVAEYLKAISYLLEQYDRVEAGEARLSDLITGFVDSSVVEEMMLA
PTNVRSELATNEITDEEEHDEASKEDDNSIDPGLARQKFVELREQYEMTRKVIKTNGRNH
TKSAAELMKLSTVFKQFRLIPKLFDYLVNNMRAMMTRVRTQERVIMKLCVDISKMPKKNF
ITLFTGNETSETWFKAALAMNQPWSEKLQAVDNDVYRSLNKLRQIEEETGLTIEQVKDIN
RRMSIGEAKARRAKKDMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYR
RGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQETGREPTPEE
LAERMLMSEDKIHKVLKIAKEPISMETPIGDDEDSHLGDFIEDNTIEMPLDSATLDSLRS
ATKEVLAGLTAREAKVLRMRFGIGMTNDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPS
RSEVLRSFLED
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaaccaacagtcacagttaaaactgcttgtcacacatggtaaagagcaagga
tatttgacctttgccgaggtcaatgaccatttaccggatgatatagttgactccgatcag
atcgaagatatcattcagatgataaatgatatgggtattcgggtgatggaagaagcaccc
gacgccgatgacctactgttactagcggatacaaaccctgatacagacgaagatgcagtc
gaggcggcggcacaagttctatctagcgtagaatccgaaattggacgcactaccgaccca
gtgcgcatgtatatgcgcgaaatgggtactgtagagctgctaacccgcgaaggagagatc
gatattgctaaacgtatagaagatggcatcaatcaggttcagtgctcggttgccgagtat
cttaaggctataagctacctacttgaacagtacgaccgcgttgaggcaggcgaggcccgc
ttatccgatctcatcactggatttgttgattcttctgttgtagaagagatgatgcttgct
cctaccaatgttcgatctgaacttgcaactaacgaaataaccgatgaagaagagcacgac
gaagcaagcaaggaagatgataatagcattgaccctggtctagcacgccagaaatttgtc
gaactgcgtgaacagtatgagatgactcgtaaggtaatcaaaaccaacggccgcaaccat
actaaatcggccgcagagcttatgaagctttctactgttttcaaacagtttcgactaata
ccgaaactgttcgattacctggtaaacaacatgcgtgctatgatgacgcgcgtgcgtacc
caggaacgcgtaattatgaagctatgtgtcgatattagtaagatgccaaaaaaaaacttc
atcacgttgtttactggtaatgagaccagcgaaacctggttcaaggctgctttggcaatg
aaccagccctggtctgaaaaactacaagcagtagataatgacgtatatcgtagcctaaat
aaactgcgccagattgaagaagaaaccggtctgactatcgagcaagtgaaggatattaac
cgccgtatgtcgattggcgaagcaaaggcaagacgcgcaaaaaaagatatggttgaggct
aatctacgtttagttatttctatcgcgaaaaaatacactaaccgcggtctgcagttcctt
gatctgatccaagagggtaatattgggttaatgaaggcggtggacaaatttgaataccgc
cgaggctacaagttttctacttatgctacctggtggatccgccaagctatcacccgctct
attgctgaccaggcgcgtaccatacgtatcccggtgcatatgattgaaactattaataag
ctcaaccgtatctcccgtcagatgctacaagaaactggaagagaaccaacaccagaagaa
ctggcagaacgtatgctgatgtcagaagataaaatccataaggtactgaaaattgccaaa
gaacctatctctatggaaacgcctattggcgacgatgaagattctcatttaggggatttt
atcgaagataataccatcgagatgccgctagattctgctacattagatagcctaaggtca
gcgaccaaggaggtattggccggtctaactgcgcgcgaagccaaggttttacgtatgcgt
tttgggatcggtatgactaacgaccacactctggaagaggtgggcaaacagtttgacgta
acccgcgaacgtattcgtcagatcgaagcaaaagcattgcgtaaattgcgtcatccaagc
cggtctgaggtcttacgaagcttcctggaagattaa
DBGET
integrated database retrieval system
