Candidatus Moranella endobia PCVAL: MPC_080
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Entry
MPC_080 CDS
T02613
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
meo
Candidatus Moranella endobia PCVAL
Brite
KEGG Orthology (KO) [BR:
meo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meo03021
]
MPC_080 (rpoH)
Transcription machinery [BR:
meo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MPC_080 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SANT_DAMP1_like
DUF5412
Motif
Other DBs
NCBI-ProteinID:
AGJ61140
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All DBs
Position
complement(97946..98803)
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AA seq
285 aa
AA seq
DB search
MIKDIQVLAYIPQGSLEAYVRITNTYQILTAEEEKVLAERLHYQGDLEAAKQLILSHLRF
VVHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPGVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQQEVEIVAKELGVTSKDVREMESRMAAQDI
TFDPTPEDDIQAGQSMIPMLYLQDKASNFVDRIEENNWDDHATDRLSTVLESLDERSQDI
IRARWLDDDNKSTLQELANRYGVSAERVRQLEKNAMKKMRLAIET
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagatattcaagtgttagcttatattccccagggcagtttggaagcctatgtt
aggattacaaatacctaccagatactgacggctgaagaagaaaaggttttagctgaacgt
ctgcattatcaaggagatttagaagcagccaagcagctgattctgtctcatttgcgcttt
gttgttcatattgcgcgtaactattcaggttatggtctaccccaggctgacctaattcag
gaaggcaatataggactaatgaaagctgtacgccgttttaaccctggagtgggagtgcgg
ttagtgtcatttgcggtccactggatcaaggcagaaattcacgaatatgtgctacgtaac
tggcgtattgtaaaagtagcgactactaaagcgcagcgcaagttgttctttaacttgcgt
aaaactaagcaacgtttaggctggtttaaccaacaagaagtagaaatcgtcgctaaagag
ttgggtgtaaccagcaaggatgtacgcgaaatggagtcccgcatggcagcgcaggatatc
acgtttgatcccacgccggaagatgatatacaagcagggcagtcgatgatacctatgctt
tacctgcaagataaagcatctaatttcgtcgatcgcatagaagagaacaactgggacgat
catgctaccgacaggttaagcacggtgctagaaagtctcgatgagcgcagccaggacatt
atacgtgcgcgttggctagatgatgacaacaaaagcacactacaggagctagccaatcgt
tacggggtttcagctgagcgtgttcggcagcttgaaaaaaatgctatgaagaaaatgcgg
ctggcaattgaaacttga
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