Candidatus Moranella endobia PCVAL: MPC_252
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Entry
MPC_252 CDS
T02613
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
meo
Candidatus Moranella endobia PCVAL
Pathway
meo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MPC_252 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meo03021
]
MPC_252 (rpoA)
03400 DNA repair and recombination proteins [BR:
meo03400
]
MPC_252 (rpoA)
Enzymes [BR:
meo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MPC_252 (rpoA)
Transcription machinery [BR:
meo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MPC_252 (rpoA)
DNA repair and recombination proteins [BR:
meo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MPC_252 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AGJ61288
LinkDB
All DBs
Position
279857..280846
Genome browser
AA seq
329 aa
AA seq
DB search
MHGSVTEFLKPRLVEIEQINSTQAKVTLEPLERGFGHTLGNALRRIMLSSMPGCAVTEAE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKKDEVILTLNKAGIGPVTAADIIHDV
DVEIVKPKQVLCHLTDNHASINMRIKVQRGRGYVPVSARMAASDEHQIGRLLLDACYSPI
ERIAYNVEAARVEQRTDLDRLVIEIETNGTIDPEEAIRRAATILAEQLEAFVDLRDVCQP
ELRASKPKFDPLLLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLAARGLSLGVRLENWPPASINDE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcatggttctgtgacagagtttctaaaaccgcgtttggtagagatcgagcaaatcaat
tcgacgcaagcaaaggtgacccttgaaccattagagcgtggctttggtcatactctgggt
aacgcactacgccgtattatgctttcatcaatgccaggttgcgcggtgactgaggctgag
attgatggtgtactgcacgaatacagtaccaaagaaggtgtacaagaagatatcttagaa
attttacttaacctaaaagggctagcagtgagagttcaagggaaaaaagatgaagttatc
ttaactctgaataaagccggcattggacctgttaccgccgccgacatcatccatgatgtt
gatgttgaaatcgtcaagccgaaacaggtactgtgccacctgaccgataatcatgcatct
atcaatatgcgtatcaaggttcagcgtggacgtggctatgttccggtttcggcacgaatg
gctgcttcggatgagcaccaaattggtcgtttgctattagatgcatgctatagccctata
gagcgcatagcctacaatgtggaagcagcgcgcgttgagcagcgcactgacctcgaccgg
ctagtgatcgaaatagaaaccaacggcacaatcgatccagaagaagcaatacgccgtgca
gccactattctggctgaacaactagaagcttttgttgacttacgtgatgtatgtcagcca
gagttgagagcatcgaaacccaaattcgatccgctcttgttgcgcccagttgatgatctg
gaattaacagtacgctctgctaactgtctaaaggcagaagctatccattacatcggtgat
ctggtacagcgcactgaagttgagctacttaaaactcccaacctgggtaaaaaatcgctg
actgagatcaaagatgttttggctgcgcgtgggttatctctgggcgtacgcctcgaaaac
tggccgccggcaagtattaatgatgaatag
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integrated database retrieval system
