Candidatus Moranella endobia PCVAL: MPC_440
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Entry
MPC_440 CDS
T02613
Symbol
recB
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
meo
Candidatus Moranella endobia PCVAL
Pathway
meo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MPC_440 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meo03400
]
MPC_440 (recB)
Enzymes [BR:
meo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MPC_440 (recB)
DNA repair and recombination proteins [BR:
meo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MPC_440 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_22
AAA_25
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AGJ61444
LinkDB
All DBs
Position
complement(488110..491655)
Genome browser
AA seq
1181 aa
AA seq
DB search
MMIFDSFNPLTLPLQGTRLIEASAGTGKTYNLTVLYLRLLLGLGGETAYPRPLSVEEILV
VTFTDTATKELRSRIRANIHLLMLACMRGESNDSLLAAILVQISDRRLAALHLLAAERQM
DNATIYTIHSFCKHILNNAVTSNILFPQTFLDDESCLYQQVSAEFWRSHCHKLPLEVARM
VQQYWEGPANLLAELLPYLQGELPMVCNPPDITESILARHARIIAVIADLKQQWRTSALE
LMTLLESHKLDRRIYSSNNLRTWLAKIDYWVSEPTVDDQVPNELARFKSSVLEEQTTDGE
PPRHELFAAVEAFYQSRLSLRELIFFMALIEIRQALKQEKQRRNEIGFDDLLSRLDQALA
GGSSGAALAESVRKRYPVAIIDEFQDTDPQQYRIFRQIYVGQSNCGMLLMGDPKQAIYAF
RGADIFTYMCARNEVDAHYTLDTNWRSSPGMINAVNHLFQSLPSPFIFSDIPFLPVMPAT
VNQTLRLVVQHQPQPALRIWLQPGAGVGISEYKQYMARQCAATIQDLLCAACEGKAWLEG
RLGKQKLIQASDITVLVRNRSEAALVYDALAELLIPAVQLSNRDSVFNTPEARELQWILQ
AVLTTEKKNELRRALATCLLGLNATAIDTLNNDERLWNKMVEDFAGYRQHWQKHGILPML
RKIMVKFCIAESLLASQGGERRLTNLLHLGELLQEASTQIVDNEFALVRWLALQVASPNS
QETNQQLRLENDRHLVQIMTVHKSKGLEFPLVFLPFAADFRVQKRPMFHDRDKYGAWLDL
SAAKDSLLLAEEERLAEDVRLLYVALTRSIYHCSIGIAPLYRGSRKKSGISDLHLSALGY
LVQQGQDGNVEHLHERLADLVARASGDIFLCDSLTWPAVTKLKLTPTPTPLLQARSWPAP
PKDIWSWKVTSGMQLYGSSSIIESQPRLDVDALGEKQEERKEELLQLTPHTFPRGAVSGT
FLHGLFKNIDFNRPLDQQYLSDVLTQKGIKAIWLPVIMHWIKSIITIPLDGYSLSLNQLT
PASRYAELSFYLPIDAVVQAHKLDRICKRYDPLSARCPPLDFLQFRGMLKGYIDLVFRWQ
GRYYLLEYKSNWLGEDIDAYTRPAIEQAMITHRYVLQYQLYALALHRFLGQRLLDYNYQR
DFGGIYYLFMRGIDLAQPENGLFYCRPDIVLVEELNNLFIG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
ctgatgatcttcgatagctttaatcccctaacgttaccgctgcagggcactcgtttgatc
gaagcgtcggcaggaactggtaaaacttataacctgactgttctatacttacgactacta
cttgggctgggcggcgagactgcgtatccacggccattgagcgtggaagaaatattggtt
gttacctttaccgatactgcaacaaaagagctacgcagtcgtattcgcgcaaatatacat
ttgctgatgctagcttgtatgcgcggtgaaagcaatgattcgctactagctgctatactg
gtacaaatcagcgaccggcggctagctgcattacatctgctggcagcggagaggcagatg
gacaatgcaacgatttataccatccatagcttctgcaaacacatactaaacaacgcggtc
acttctaacatactatttccgcaaactttcctggatgatgaatcttgtttgtatcagcag
gtaagcgctgaattctggcgaagccattgccataagttgccactggaagtagcgcgcatg
gtgcaacaatactgggaagggccggcaaacctactagctgaattactgccttatttacag
ggtgaattgcccatggtatgtaatccgccagatataactgagtctatcctagctaggcat
gctcggattattgctgttattgcagacctaaaacagcaatggcgtacgtctgcgttagag
cttatgacgctactagagagccataaactagaccgtcggatatacagcagcaataatcta
cggacctggctggcaaaaattgattactgggtgagtgagccgaccgtggatgatcaggta
ccgaatgaattggcgcggtttaaaagctcagtgctggaggaacaaaccaccgacggagaa
ccccctcggcatgagttatttgctgctgtggaggctttttatcagtccaggctctcgctt
cgtgagctaatttttttcatggcgttaattgaaatccgccaggcattaaaacaagaaaaa
caacgtcggaatgaaataggattcgacgatttactgagccgcctggatcaggcgttggct
ggtggtagtagcggtgccgctctagctgaatcagtacgcaagcgctatccggtagcgata
atcgacgagtttcaggatactgacccacagcagtaccgaatttttcgtcaaatttacgtt
ggtcaatctaactgtggaatgttgttgatgggtgacccgaaacaggctatctatgcgttt
cgcggagctgatatttttacttatatgtgcgctaggaatgaagttgatgctcactatacc
cttgatactaactggcgttcgtcgcctgggatgataaatgcagttaatcatttgttccaa
agcttgccgtcgccgtttatcttcagcgatattccatttttaccagtgatgcctgctact
gtcaatcaaacattgcgtttggtagtgcagcatcagccacagccagcgctgcgtatttgg
ctacagccgggcgccggcgttggcataagtgaatataaacaatacatggcgcgccagtgt
gccgctactattcaagatttgctatgcgctgcctgtgaaggcaaagcctggcttgaaggg
cgactgggtaagcagaagctaatacaagcatcggatattactgtgctagtacgcaaccgc
agcgaggcggcactggtgtatgatgcactagcggaactgctgattccagcagtgcaactc
tccaaccgtgacagtgtcttcaatacacccgaggcgcgcgaactgcaatggatcttgcag
gcagtgttgacgacagagaaaaagaatgagctgcgccgggcactggctacctgcctgctc
gggttaaatgctaccgctattgatacattgaataacgatgagcgtctgtggaataaaatg
gttgaagattttgctggttatcgtcagcactggcaaaaacatggcatattgccgatgctg
cgtaaaataatggtaaaattttgcatcgctgaaagcttattagccagccaggggggcgaa
cgccgcctgactaacttactccatctaggtgaactattacaggaagcatctacgcaaata
gtagataatgaattcgcgctagtccgttggttagcgctacaggttgcatcccctaattca
caggaaactaatcagcaattgcggctggaaaacgatcgtcatctggtacaaatcatgaca
gtgcataaatctaaaggtttggagttcccgcttgtgttcttgccattcgcagctgatttc
cgcgttcaaaaacgaccgatgtttcacgatcgagataagtacggggcctggttggatctt
agcgctgctaaagatagtttacttttagctgaagaggagcgattagcagaagatgtgcgt
cttctttatgtagcgctaacgcgctctatttaccattgtagtatcggcatagcgccactg
tatcgcggtagtcgcaaaaaatctggtatcagcgatctgcatttgagcgcgcttggctac
ctagttcaacagggtcaggatggcaatgtggagcatcttcacgaacgactggcggattta
gtggcgcgcgctagcggcgatatttttttgtgtgactcgttgacttggccagctgttact
aaactaaaactcacgccaacgccaacgcccctactgcaagcccgcagctggcctgcgccg
ccaaaagatatctggtcctggaaggtaacctcaggtatgcagctatatggcagttcgtca
ataattgagtcgcagccgaggttagatgtggatgccttgggtgagaagcaagaagagcga
aaggaagaactgttacagttgacaccacatacttttcctcgtggcgctgtttctgggaca
tttttacacggattatttaaaaatatagattttaaccggcctttggaccaacagtatctg
agtgatgttctgacgcagaaaggcatcaaagcaatttggctgccagtgatcatgcactgg
ataaaaagcattatcactataccgttagatggttattcactttcgctcaatcaactcaca
ccggctagccgctatgctgaattatcgttttatcttccaatagatgctgtcgtgcaggcg
cacaagttggaccggatctgcaagcgttatgatcctctttctgcccgctgtccaccgcta
gattttctgcagttcaggggtatgctcaaagggtatatagatcttgtgtttcgctggcaa
ggtcgttattacctgcttgaatataaatcaaattggttaggtgaggatatcgatgcttac
actagaccagcaattgaacaggcaatgattacccatcgctatgtactgcagtatcaactt
tatgcgcttgctttgcatcggtttttgggccaacgcttattggattataattaccagcgt
gattttggcgggatatattacctatttatgcgcggtatagacttagcacaaccggaaaac
gggctgttctattgccggccggacattgttttagtcgaggaacttaataatttatttatt
ggctaa
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