Mesorhizobium sp. ORM16: ACIU1A_03395
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Entry
ACIU1A_03395 CDS
T11565
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
Organism
meor Mesorhizobium sp. ORM16
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
Motif
Other DBs
NCBI-ProteinID:
XKI89155
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Position
complement(611685..615065)
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AA seq
1126 aa
AA seq
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MRFWKARKAQKALEAVVAHNDDCDDDSRVLEARMNEAVAALKRSSGKRNFLYEIPWYVVI
GPPGAGKTTALVNSGLNFPLAGSGDAQPVAGVGGTRACDWWFTDQAVLIDTAGRYTTQDS
NPEIDKKSWLAFLSLLKRYRTRQPINGVILAISLADVMSFDDQQLDAHIVEIRSRLREIH
ETLKIQFPVYVLFTKADLVSGFTDYFGGFDEALRRKVWGTTFQTAERDRNMAAAAPAELD
GLAERLADEMADRLQEEADPVTRISIFGFPAQFGALRGRITSFVAGLFDPSRSQVNASLR
GLYFSSGTQEGTPIDQVLGAIGRNFGGNSRPHLSGTGKSFFLHDLLTDVIFAESGWVSYD
KSAARRAAVARFGGLGTIALIAAAALGTLALSFAANRSLIASATVAMGQYRATAEPLLKA
ATVTDVDLENVIGPLDQLRDLPAGFEAAELATPIGETFGLSQRERLLSASRTAYRKGLER
MLRSRLLIQAERTIQAKMGDPAALYEPLKIYLMLGGKAPKVDDALIVSWMKQDWEQNRYP
GENNREGRAHLEKHLRAMLALDDAYDPVFELNQPLVEAAQRSLERMSLADRATALIKSAI
YAAALEDFSISKQGGPEAQLLFERIDGSDLADLRVPGLYTNAGFNRFYLAQLSRIAQMLV
DEQWVLGGGGEQGDIDQQLLRLGPELLDRYGKAFAAAWNSVLDQLKFKAMLADKPHYTAL
SAAASPSSPIKRLFSAIANETGLTRDPGDGPGAETESAAQNQQRSAAELAKGLARIGIHI
ANGKSQIRAGAQPADVQKLNPGANIEARFKSFQVLVNGPAGHRPIDALTQNFSDIYQSLR
LATEVPSQVERLNGNLQLQIATLRANVSRLPKQLGRMVNTTADEFQGNVAETSVTNLNQI
LDQTVTAPCEAAINGRYPFDGSSTEDVAMADFAKLFAPGGLMDRFFAQNLASLIDMTGQD
WRWKQDTRFGRNLSKSTLKDFQLAAEIRIAFFPSGASVPSVSVTFTPFSLHGDADMAVLD
IDGQTVQSNQTGNGPSTVTWPTGTATPSASLSLTPEMPGRQSAITFEGPWALTRLLSKAA
ITGNEGSMQARFVIGGRDVTYTIQTGSGTNLFLLPALSGFTCPKAF
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
ctgcgtttctggaaagcgaggaaggcgcaaaaagcgctcgaagccgtcgttgcgcacaat
gacgactgcgatgacgattctcgggtgctcgaagcgcggatgaatgaggccgtggcggcg
ctcaaacggtcgagcggcaagcgcaactttctctatgagatcccctggtacgttgtcatc
ggcccgccgggtgccggcaagacaacggctctggtcaattcaggcctgaattttccgctt
gccggttcgggggacgcccaaccggtggccggtgttggcggaacacgtgcctgcgactgg
tggtttaccgatcaggccgtgctgatcgacaccgcaggtcgttatacgacgcaggactcc
aatcccgagattgacaagaagagctggctcgcattcctgtcactgctcaagaggtaccgc
accagacaaccgataaacggcgtcatcctggccatcagccttgccgatgtgatgagcttc
gatgatcagcagcttgatgcccacatcgtcgagatacgcagccgcctgagagaaattcac
gagacgctgaagatccagtttcccgtctatgtgcttttcaccaaggccgatctggtttca
gggttcacggattatttcggcggtttcgacgaggcgctcagacgcaaggtatggggcacg
acattccagacggcggagcgcgataggaacatggccgccgcggctcctgccgaactcgat
gggctggcggaacgactcgcggacgagatggccgaccgcctccaggaagaggctgatccg
gtcacgcgcatctccatcttcggctttccggctcagttcggcgcgctgagggggcgcata
accagttttgtcgccggtctattcgacccgtcccgcagccaggtgaacgccagcctgcgt
ggactctatttttcgtcaggcacgcaagagggaacgcccatcgatcaggtgctgggcgca
atcggccgcaatttcgggggcaattcccgcccgcatctttccggaaccggcaaaagcttc
tttttgcatgatctgctgacggacgtcatttttgccgaatcgggatgggtttcgtatgac
aaatcagctgcgaggcgggcggcggtggccagatttggcggcctcggtacgatagcgctg
atcgctgctgccgcactcggtacgctcgctctgagcttcgcggccaaccgctcgctgatc
gcgtccgcaacggttgccatgggccagtatcgcgcgacggcggaaccgctgctcaaggcg
gccacggttaccgatgtggaccttgaaaacgtcatcggcccgctcgaccagttgcgcgac
ctgccggccgggttcgaagccgctgagctagcgacaccgatcggggagacgttcggcctc
agtcagcgggaaagacttctttccgcgtcccggaccgcttatcggaaaggcctggaacgc
atgttgcgctcgcgcctgctgatccaggccgagcgaacgatccaagccaagatgggcgat
cccgccgcactctacgagccgttgaaaatctacctcatgcttggtggcaaagcgccgaag
gtcgatgacgcgctgatcgtttcctggatgaagcaagattgggaacagaaccgatacccg
ggcgaaaacaaccgcgagggacgagcgcacctcgaaaagcacctgcgcgccatgctcgcc
ttggacgacgcctatgaccccgttttcgaactgaaccagccacttgttgaagccgcacaa
cgctctctcgaacgcatgagccttgccgatcgagcgaccgctttgatcaagtcggcgatc
tacgcggcggcgctggaggacttttccatttccaagcaaggtggtcccgaagcgcaactg
ctgttcgaacgtatcgatggcagcgatctggcggaccttcgtgttcccggtctctacact
aacgccggcttcaacaggttctaccttgcccaactctcgcgcattgcgcagatgctcgtc
gacgagcagtgggttctcggtggtggcggagagcaaggcgacatcgatcagcaattgctc
aggctcggcccggaacttctcgatcgctacggcaaggcgttcgccgcggcgtggaacagc
gttctcgaccagttgaaattcaaggcgatgctggcggacaagccgcactataccgcgctt
tcagccgctgcctcccccagttcgccgataaagcggctgttttcggcgatcgccaacgaa
acggggctgacacgggacccaggtgacggtcctggcgccgagacagaatccgcggctcaa
aaccagcaacgcagcgccgcagaattagccaagggcttagcccgtatcggcatacacata
gccaacggcaaatcgcaaatccgcgccggcgcacagcccgctgacgtacagaagttgaat
ccgggcgcgaacattgaagcgcgattcaaatcattccaggtcctggtgaacgggcccgcc
ggacatcgcccgatcgacgcactaacccagaacttcagcgacatctatcaaagcctgcga
ttggccaccgaagttccttcgcaggtggagcggctcaacggtaatctgcagctacagatt
gccacccttcgcgccaatgtctcgcgtctgcccaagcaactcggccggatggtcaacacg
acggcagatgagttccaaggtaacgtcgccgaaacctcggtgacaaacttgaaccagata
ctcgaccagacggtcacagccccctgcgaggcagcgatcaacggccgttaccccttcgac
gggagcagcaccgaggatgtcgccatggccgatttcgcgaagctgttcgccccaggcgga
ctgatggaccggttctttgcacaaaatctggcctcgctgatcgacatgaccggccaggac
tggcgttggaaacaggatacgcgctttggacgcaacttgtcgaaatcgaccttgaaggac
ttccagttggctgcggaaatccgcattgccttttttccatcgggcgcttcagtaccctcc
gtcagcgtcacctttacacccttctcgctgcatggcgatgccgacatggccgtacttgat
atcgatggccagaccgttcagagcaaccagaccggaaatgggccgagcacggtgacttgg
ccgaccggtacggctaccccatccgcgagcctcagcctgacgccagaaatgccggggcgc
cagtccgccatcacgttcgaagggccgtgggccttgacgcggcttctgagcaaggcggct
atcacgggcaacgagggcagcatgcaggcccgcttcgtgatcggcgggcgcgacgtcacc
tacacgatccagacagggtccggcaccaacctcttcctgctccctgccctttccgggttc
acctgtcccaaggcgttctga
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