Mesorhizobium sp. ORM16: ACIU1A_10425
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Entry
ACIU1A_10425 CDS
T11565
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
meor Mesorhizobium sp. ORM16
Pathway
meor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACIU1A_10425 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meor03021
]
ACIU1A_10425 (rpoB)
03400 DNA repair and recombination proteins [BR:
meor03400
]
ACIU1A_10425 (rpoB)
Enzymes [BR:
meor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACIU1A_10425 (rpoB)
Transcription machinery [BR:
meor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACIU1A_10425 (rpoB)
DNA repair and recombination proteins [BR:
meor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACIU1A_10425 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
XKI87998
LinkDB
All DBs
Position
2009901..2014037
Genome browser
AA seq
1378 aa
AA seq
DB search
MAQTQTFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVDEPKGGRPDEGLQAVFK
SVFPISDFSGSSMLEFVKYEFEGPKFDVDECRQRDLTYAAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQDVYMGDMPLMTSNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDSKDVVHARIDRRRKIPVTSLLMALGMDGEEILSTFYNKITYKR
AGDHWRIPFNVDRFRGLKAVGDLVDADTGEVVVEAGKKITARQARQLGEKGLKAIKATDE
DLLGNYLAEDIVNYATGEIFLEAGDEIDDKTLKVLLGTGEDEIQILDIDHVNVGAYIRNT
LAVDKNESRQDALFDIYRVMRPGEPPTLETAEAMFNSLFFDSERYDLSAVGRVKMNMRLE
LKAEDTVRVLRKDDILAVVKTLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRVGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRKIVDGKLTNDVVYLSAMEEAKHHVAQANAELDKDGRFVDEFVICRSAGEVMMAPRENV
DLMDVSPKQMVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEPIVAR
DSGAAIGARRGGIVDQVDATRIVIRATEDLDPGKSGVDIYRLMKFQRSNQNTCINQRPLV
RMGDRVNKGDIIADGPSTELGDLALGRNVLVAFMPWNGYNYEDSILLSERIVADDVFTSI
HIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYARLSDVLVGKEAIAGPKGFKKGSTLSKDTLDEYPRSQWW
QFAVENEKLQSELEALRGQYDDSKKALEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KMQPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLG
WACAGMGRKIGEMIDAYKSAGDIKPLRKTLESFMPANDRNEPVREYDDESIVRLSEQMRR
GVSIATPVFDGAHEADINVMLEQAGLHTSGQSQLYDGRTGEPFDRKVTMGYIYMLKLHHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELENTKLDEAPVRLPDAAE
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggcccagacccagactttcaatggccgcagacgcgtacgcaagttcttcggaaagatc
cctgaagttgcggagatgccgaacctcatcgaggttcagaaggcgtcctatgaccagttc
ctgatggtggacgagcctaagggcggacgtccggacgagggactgcaggctgttttcaag
tcggtcttcccgatctccgatttttccggctcctcgatgctggagttcgtgaagtacgag
ttcgaaggaccgaaattcgacgttgacgaatgccgtcagcgcgacctcacctatgccgcg
ccgctgaaggtgacgctgcgcttgatcgtgttcgatatcgacgaggataccggcgcgaag
tcgatcaaggacatcaaggagcaggacgtctacatgggcgacatgccgctcatgacctcg
aacggcaccttcatcgtcaacggcaccgagcgcgtcatcgtctcgcagatgcaccgctcg
ccgggcgtcttcttcgaccacgacaagggcaaatcgcactcgtcgggcaagctcctgttt
gccgcgcgcgtcatcccctatcgcggttcgtggctcgacatcgagttcgattccaaggac
gtcgtgcacgcccgcatcgaccgtcgccgcaagattccggtgacgtcgctgctgatggcg
ctcggcatggacggcgaagagatcctgtcgaccttctacaacaagatcacctacaagcgc
gccggcgatcactggcgcattccgttcaacgtggatcgtttccgcggcctcaaggccgtc
ggcgacctggtcgacgccgacacgggtgaggtcgttgtcgaggccggcaagaagatcacc
gcccgccaggcccgccagctcggcgaaaagggcctgaaggcgatcaaggcgaccgacgag
gacctgctcggcaactatctcgccgaggacatcgtcaattacgccaccggcgagatcttc
ctcgaggccggcgacgagatcgatgacaagacgctgaaggtgctgcttggcaccggcgag
gacgagatccagatcctcgacatcgatcacgtcaatgtcggcgcctacatccgcaacacg
ctcgccgtcgacaagaacgagagccgccaggacgcgctgttcgacatctatcgtgtcatg
cgccccggcgagccgccgacgctcgaaaccgccgaagccatgttcaactcgctgttcttc
gacagcgagcgctacgacctgtccgccgtcggccgcgtcaagatgaacatgcgcctcgaa
ctcaaggccgaggacaccgtgcgcgtgctgcgcaaggacgacatcctggccgtggtcaag
acgctggtcgaactgcgtgacggcaagggcgagatcgacgacatcgacaatctcggcaat
cgccgcgtgcgttcggtcggcgagctgatggaaaaccagtaccgcgtcggcctgctgcgc
atggagcgcgcgatcaaggagcgtatgtcctcgatcgagatcgacacggtcatgccgcag
gacctgatcaacgccaagccggcggctgccgccgtgcgcgagttcttcggttcctcgcag
ctgtcgcagttcatggaccagaccaatccgctgtcggagatcacccacaagcgccgtctc
tccgcgcttggaccgggtggtctgacccgcgagcgcgccggcttcgaggtgcgcgacgtg
cacccgacgcattacggccgcatctgcccgatcgagacgccggaaggcccgaatatcggc
ctgatcaactcgctcgccaccttcgcgcgcgtcaacaagtacggcttcatcgagagcccg
taccgcaagatcgtcgacggcaagctgaccaatgacgtcgtctatctgtcggcgatggaa
gaggccaagcaccatgtcgcgcaggccaatgccgagctcgacaaggatggtcgctttgtc
gacgaattcgtcatttgccgcagtgccggcgaagtgatgatggcgccgcgcgaaaacgtc
gacctgatggacgtttcgcccaagcagatggtgtcggtggccgcggccctgatcccgttc
cttgagaacgacgacgccaaccgcgcgctgatgggctcgaacatgcagcgccaggccgtg
ccgctggtgcgcgccgaggcgccgttcgtcggcaccggcatggagccgatcgtcgctcgt
gactcgggcgccgccatcggcgcccgccgcggcggcatcgtcgaccaggtggacgcgacg
cgcatcgtcatccgcgcaacggaagacctcgatccgggcaagtccggcgtcgacatctac
cggctgatgaagttccagcgttcgaaccagaacacctgcatcaaccagcgtccgctggtg
cgcatgggcgaccgggtcaacaagggcgacatcatcgcggacggtccttcgaccgagctc
ggcgatctggctctcggccgcaacgtgctggtcgcgttcatgccgtggaacggctacaac
tacgaggactcgatcctcctgtccgagcgcatcgtcgccgacgacgtcttcacctcgatc
cacatcgaggagttcgaggtcatggcgcgcgacaccaagctcggaccggaggaaatcacg
cgcgacattccgaacgtctcggaagaagcgctgaagaacctcgatgaagccggcatcgtc
tatatcggtgccgaagttcagccgggcgatatcctggtcggcaagatcacgccgaagggc
gaaagcccgatgacgccggaagaaaagcttctgcgcgccatcttcggcgaaaaggcatcc
gatgtgcgcgacacctcgatgcgcatgcctccgggcaccttcggcaccgtcgtcgaggtg
cgcgtgttcaatcgccacggtgtggagaaggacgagcgcgccatggcgatcgagcgcgag
gagatcgaacgcctcgccaaggaccgtgacgacgagcaggcgatcctggatcgcaacgtc
tacgcgcgcctttccgacgtgctcgtcggcaaggaagcgatcgccggaccgaagggcttc
aagaagggctcgacgctgtcgaaggacacgctcgacgagtatccgcgttcgcagtggtgg
cagttcgccgtggagaacgaaaagctccagagcgaactggaagccctgcgcggccagtac
gacgattccaagaaggcactcgaacagcgcttcatggacaaggtcgagaaggtgcagcgc
ggcgacgaaatgcctccgggcgtcatgaagatggtcaaggtcttcgtggcggtgaagcgc
aagatgcagccgggtgacaagatggccggccgtcacggcaacaagggtgtcgtgtcgcgc
atcgttccggtcgaggacatgcctttcctcgaggacggcacgcatgccgatatcgtgctc
aacccgctgggtgtgccgagccgcatgaatgtcggccagatcctggaaacgcatctgggc
tgggcttgcgccggaatgggcaggaagatcggcgagatgatcgacgcctacaagtctgcc
ggcgacatcaagccgctgcgcaagacgctggagagcttcatgcccgccaacgatcgcaac
gagccggtccgcgagtatgacgacgagagcatcgttcgcctgagcgagcagatgcgccgc
ggcgtctcgatcgcaaccccggtgttcgacggcgcgcacgaggccgacatcaacgtcatg
ctggagcaggcgggcctgcacaccagcggtcagtcgcagctctatgacggacgcaccggc
gagccgttcgatcgcaaggtgacgatgggctacatctacatgctcaagcttcaccacctc
gtggatgataagatccacgcgcgttcgataggtccgtactcgctcgtcacccagcagccg
ctgggcggcaaggcgcagttcggcggccagcgcttcggcgaaatggaggtctgggcgctg
gaagcctacggcgccgcctatacgctgcaggaaatgctgacggtgaagtcggacgacgtc
gctggccgcaccaaggtctacgaggcgatcgtccgcggtgacgacaccttcgaggccggc
attcccgagagcttcaacgttctcgtcaaggagatgcggtcgctcggcctcaacgtcgaa
ttggagaacaccaagctcgacgaagccccggttcggctgcccgacgcagcggaataa
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