KEGG   Mesorhizobium sp. ORM16: ACIU1A_16220
Entry
ACIU1A_16220      CDS       T11565                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
meor  Mesorhizobium sp. ORM16
Pathway
meor03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:meor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    ACIU1A_16220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meor03400]
    ACIU1A_16220
DNA repair and recombination proteins [BR:meor03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     ACIU1A_16220
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: XKI89018
LinkDB
Position
complement(3189036..3189941)
AA seq 301 aa
MAPRASWKGYLKLSLVSCPVRLYPATSASERISFNQLHKKTHNRINMKPVDPELGLVERS
DLVKGYEYEDKQYIIIDDSDLDAVRIESNHTMNIEAFVDEDEVDVIYQDAPYYMAPDGAM
AEETFAVLREAMRKSGKLAIARLVLSSRERVVTIGARENGMFVCTLRNPNEVRGTAEYFG
NIPAGNPDPEMLQLAEALIKQKETTFDPKNYEDRYEIALMAMIREKLKGHKPIIAAAPER
GNVINLMDALKASLSQSKPPAKSKSKADETPAKPAKKTAAGGAAENPLKANLLKAVGKSK
K
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcgcccagggcaagttggaaaggttacctcaaactcagtcttgtgagctgtccggtg
cggctataccccgccaccagtgccagcgagcgcatctcgttcaaccagttgcacaagaag
acccacaaccgcatcaacatgaagccggtcgatccggaactcggactggtcgagcgttcg
gacctggtcaagggctacgagtacgaggacaagcagtacatcatcatcgacgatagcgac
ctcgacgcggtgcgcatcgaatccaaccacacgatgaacatcgaggccttcgtcgacgag
gacgaggtcgacgtcatctaccaggacgcgccctattacatggcgccggacggcgcgatg
gcggaggagactttcgccgtgctgcgcgaagccatgcgcaaatccggcaagctggcgatc
gcgcggctagtcctgtccagccgcgagcgcgtggtgacgatcggcgcgcgcgaaaacggc
atgttcgtgtgcacgttgaggaacccgaacgaagtgcgcggcacggctgaatatttcggc
aatatccctgccggcaacccggatcctgaaatgctgcaactcgccgaagcgctgatcaag
cagaaggaaaccaccttcgatccgaagaactacgaggatcgctacgagatcgcgctgatg
gcgatgatccgcgagaagctgaagggccacaagcccatcatcgcggcggcacccgagcgc
ggcaacgtcatcaatttgatggatgcgctgaaggcgagcctgtcgcagtcgaagccgccg
gccaagtcgaagagcaaggccgacgagacgcccgccaagcccgccaaaaagacggccgcg
ggcggcgctgctgaaaatccgctgaaagccaacctgctgaaggcggtcggcaagagcaag
aagtga

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