KEGG   Mesorhizobium sp. ORM16: ACIU1A_27910
Entry
ACIU1A_27910      CDS       T11565                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
meor  Mesorhizobium sp. ORM16
Pathway
meor03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:meor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACIU1A_27910 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:meor03021]
    ACIU1A_27910 (rho)
   03019 Messenger RNA biogenesis [BR:meor03019]
    ACIU1A_27910 (rho)
Transcription machinery [BR:meor03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     ACIU1A_27910 (rho)
Messenger RNA biogenesis [BR:meor03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ACIU1A_27910 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT S1CSD-TOTE-2 AAA_25 AAA_22 DnaB_C NPHP3_N
Other DBs
NCBI-ProteinID: XKI85470
LinkDB
Position
complement(5575341..5576606)
AA seq 421 aa
MQEMKLTEFKNKKPPELIAYAESLEVENASVMRKQELMFAILKKLAAQDIEIIGDGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRSPKEGERYFALLKVN
TINFDDPEKIRHKIHFDNLTPLYPTKRLKMEIDNPISKDISPRVIDLVAPIGKGQRALIN
AQPRTGKTVLMQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNCEIQLDRKVADKRIYPA
MDILKSGTRKEDLLVPRADLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNADFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaagaaatgaaactcaccgagttcaagaacaagaaaccgccagagctgatcgcctat
gccgaatcgctcgaggtggagaacgccagcgtcatgcgcaagcaggagctgatgttcgca
atcctcaagaagctggccgcccaggacatcgaaatcatcggcgacggcgtggtcgaagtg
ctccaggacggtttcggtttcctgcgctcggccaacgccaattatctgccgggtcccgac
gacatctatatctcgccctcgcagatccggcgcttttcgctcaagaccggcgatacggtc
gaagggccgatccgcagtccgaaagagggcgagcgctatttcgcgctgctcaaggtcaac
acgatcaatttcgacgatcccgaaaagatccgccacaagatccacttcgacaatctgacg
ccgctctatccgaccaagcggctgaagatggagatcgacaacccgatctccaaagatatc
tcgccgcgcgtgatcgacctggtggcgccgatcggcaagggccaacgcgcgttgatcaac
gcgcagccgcgtaccggcaagacggttctcatgcagaacatcgcccactcgatcaccgcc
aaccatccggaatgctacctgatcgtgcttctgatcgacgagcggccggaggaagtgacc
gacatgcagcgctcggtgaagggcgaggtgatctcctcgactttcgacgagccggctgtg
cgccacgtgcaggtcgccgaaatggtcatcgagaaagccaagcggctggtcgagcatggc
cgtgacgtcgtcatcctgctcgattcgatcacccgcctcgggcgcgcctacaacaccgtg
gtgccgtcttccggcaaggtgctgaccggcggcgtcgacgccaatgcgctgcaaaggccg
aagcgtttcttcggcgccgcccgcaacatcgaggaaggcggttcgctgaccatcattgcc
accgcgctgatcgacaccggcagccgcatggacgaagtcatcttcgaagagttcaagggc
accggcaactgcgaaatccagctcgaccgcaaggtcgccgacaagcgcatctacccggcc
atggacattctgaagtcgggtacccgcaaggaagacctgctcgtgccgcgcgctgacctg
cagaagatcttcgtgctgcgccgcatcctggcgccgatgggaacaaccgacgcgatcgag
ttcctcatcgacaaactgaagcagaccaagaccaatgcggacttcttcgattcaatgaat
acgtag

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