Methylovorus sp. MP688: MPQ_0597
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Entry
MPQ_0597 CDS
T01361
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mep
Methylovorus sp. MP688
Pathway
mep03030
DNA replication
mep03430
Mismatch repair
mep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MPQ_0597 (holA)
03430 Mismatch repair
MPQ_0597 (holA)
03440 Homologous recombination
MPQ_0597 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mep03032
]
MPQ_0597 (holA)
03400 DNA repair and recombination proteins [BR:
mep03400
]
MPQ_0597 (holA)
Enzymes [BR:
mep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MPQ_0597 (holA)
DNA replication proteins [BR:
mep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MPQ_0597 (holA)
DNA repair and recombination proteins [BR:
mep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MPQ_0597 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
B12-binding_2
DUF4423
Motif
Other DBs
NCBI-ProteinID:
ADQ83779
LinkDB
All DBs
Position
complement(595910..596938)
Genome browser
AA seq
342 aa
AA seq
DB search
MRLPAEQLAKHLEKGLEPIYVLTGDEPLAQRECLDAIRAKARALGFDERTSLTVERNFNW
QQIAAFGQSISLFASQRILELHIPSGKPGTDGGKALQAMAAKPLPDAVTIIILPKLDRDG
KNSAWYGALENAAVTLTLQEVEAAQLPQWIARRLAMQQQETDQATLEFLAHQVEGNLLAA
HQEIQKLGLLYPAGPLAAEAVRDAVLNVSRYDAFQLGEAVLAGDTERTVRILQGLRDEGV
QPIAVMNPLLWVLRPLVRVKEAETRGENLNQAMQQARIYGDRQALTRRALARLSLRQLQA
ALHKLAEIDKTAKGLIRQDAWLEISRLCFGLAKVSSRAARRT
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttaccggcagagcaactcgccaagcatcttgaaaagggcctggagcccatctat
gtgctgaccggcgacgaacctttggcccagcgcgagtgtctggatgccatacgtgccaag
gctcgtgcactgggctttgatgaacgcaccagcctgaccgtggagcgcaatttcaactgg
cagcagattgccgcatttggtcagtcgatttcgctgtttgccagccagcgcatactggaa
ttgcatattccctccggcaagcccggcaccgatggcggcaaggcattgcaggccatggca
gccaaaccgctgcccgatgcggtcaccatcatcatcctgcccaagctggatcgcgatggt
aaaaacagcgcctggtatggtgcccttgaaaatgcggcagtcaccctgaccttgcaggaa
gtggaggctgctcagctgccgcaatggattgcgcgcaggctggccatgcagcagcaagag
acggatcaggccacgctggagtttctggcgcatcaggtggaaggcaatctcctggcggca
catcaggaaatccagaaactggggctcctgtatccggcgggaccacttgctgctgaagcc
gtgcgcgatgccgtcttgaatgtatcgcgctacgatgcgtttcaacttggcgaggccgta
ctggccggtgataccgaacgcacggtgcggatactgcaaggcttgcgcgatgagggcgtg
cagcctatcgcggtcatgaatccgttgctgtgggtgctgaggccgctggtacgcgtgaaa
gaagccgagacacgcggcgagaatctgaaccaggccatgcagcaagcgcgcatttacggc
gaccggcaggccctgactcgacgagcgctggcaagactgagcctgcgccaactgcaagcc
gccctgcacaagctggccgagatcgacaagaccgccaagggcctgatccgtcaggatgcc
tggcttgaaatatcgcgcctgtgcttcggcctggcaaaagtaagcagccgcgcagcacgg
cgcacataa
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