Methylovorus sp. MP688: MPQ_0701
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Entry
MPQ_0701 CDS
T01361
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mep
Methylovorus sp. MP688
Pathway
mep03410
Base excision repair
mep03430
Mismatch repair
mep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MPQ_0701 (recJ)
03430 Mismatch repair
MPQ_0701 (recJ)
03440 Homologous recombination
MPQ_0701 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mep03400
]
MPQ_0701 (recJ)
DNA repair and recombination proteins [BR:
mep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MPQ_0701 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MPQ_0701 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MPQ_0701 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADQ83877
LinkDB
All DBs
Position
701281..702990
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AA seq
569 aa
AA seq
DB search
MVVNIVRREPDEAAAATLAASGLSPLLAQLLAARGVKTPVQLEASLAGLIPPDRLTNNTR
MAALLADAIVAKRSLLVVGDYDADGATATAVMVRGLRMLGAVVDFLVPNRFEYGYGLTPE
IVELAAQSKPDFIITVDNGIASVDGVARANALGMSVLVTDHHLPGDHVPAAACIVNPNQH
GCDFPSKHLAGVGVAFYVMLALRAEMRARGLFEGKAEPNLTSLLDLVALGTVADLVKLDD
NNRILVEQGLRRIRAGQCSPGILWLMRLAGREPASSCAQDLGFSVGPRLNAAGRLDDMTL
GISCLLAEDDQSAHAMAQQLHALNHERRSIEADMQESALAELDGLDAEGRYSLSLYQPDW
HQGVIGILASRIKERYHRPVIAFAQAGDGVLKGSGRSIPGLHLRDALDLLSKREPDLILK
FGGHAMAAGLSIREIDMERFRLGFESVVAGLLTPADLESIIEVDGALTLEDMHWDVAVAL
QRQVWGQGFPPPMFCDDFEVVAQRIVGGKHLKLTLSTRGRAVDAIFFRQEEFLPQYVTAV
YELQTNAFNGARNVQLLIKHWQPVAAQSN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
ttggtggttaatattgtaaggcgcgagcctgacgaggctgctgctgccacgctggcagcc
agtggcttgtcgccattgctggcgcagctgcttgcggcgcgcggagttaaaacgccagtg
cagcttgaagcctcgctcgccgggctgattcctcctgatcgtctgaccaataacactcgc
atggcggctttgctggcagatgcgattgtcgcaaagcgctctctgctggttgtcggcgat
tatgatgcggatggggcaaccgccaccgccgtgatggtgcgcggcttgcgcatgctgggc
gcagtagttgattttctggtgcctaatcgctttgaatatggctacggcctgacgcctgaa
attgtggagcttgctgctcagtccaagccggatttcatcattaccgtggataatggcatt
gccagcgtcgatggggtggcgcgtgctaatgcgctgggcatgtccgtactggttacggat
caccatttgcccggcgaccatgtgccggcagccgcctgcattgtgaatcccaatcagcat
ggctgcgatttccccagcaagcatcttgccggagtgggcgtggcgttttatgtgatgctg
gctttgcgtgccgagatgcgggcgagaggcttgtttgagggcaaggctgagccgaatctg
accagtctgctggacttggtggccttgggaacggtggctgacctggtcaagctggatgac
aacaaccgcattctggttgagcaggggctgcggcgtattcgtgccggccagtgcagcccg
ggtattttatggctgatgcgtctggcaggccgtgagcccgcctcaagttgtgcgcaggat
cttggtttcagcgtggggccaaggctgaatgcggcaggtcgcctggatgacatgacgctg
ggcatcagctgcctgctggctgaggacgatcagtcagcccatgccatggcccagcagctg
catgccctcaaccatgaacgtcgcagcatagaggcggatatgcaggaaagtgcgctggca
gagctggatggcctggatgcagaaggccgctatagcctgagtttgtatcagccggactgg
caccagggggtgataggcattctggcatcgcgcatcaaggagcgttaccatcgccccgta
attgcctttgcccaggcgggcgatggggtgctcaaaggctcggggcgttcgatacccggg
ctgcatctgcgggatgcgctagatctgctgtccaagcgtgagcctgatctgatactcaag
tttggcgggcatgccatggcagccgggctcagtattcgcgaaattgatatggagcgtttc
cggctgggcttcgagtctgtggtggcaggcttgctgactccagcggatctggagtccatt
attgaagtcgacggggcgctgacgctggaggatatgcactgggatgtagcggtggcgctg
cagcgccaggtgtgggggcaggggtttcctcccccgatgttttgcgacgattttgaggtg
gtggcgcaacggattgtcggtggcaaacatctaaagcttactttgtcgacccgtggacgc
gccgtggatgcgatatttttccggcaggaggagtttttgccgcagtatgtcacggcggtg
tatgaattgcagaccaatgcctttaacggcgcccgcaacgtacagttgctgatcaagcac
tggcagcctgtggcggcgcagtcaaattga
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