Methylovorus sp. MP688: MPQ_1739
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Entry
MPQ_1739 CDS
T01361
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mep
Methylovorus sp. MP688
Pathway
mep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPQ_1739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mep03019
]
MPQ_1739
Enzymes [BR:
mep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MPQ_1739
Messenger RNA biogenesis [BR:
mep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MPQ_1739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ADQ84892
LinkDB
All DBs
Position
1787931..1789310
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AA seq
459 aa
AA seq
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MSTENIRFADLGLAPEILKALEEFGYTVPTPIQAQAIPVVLQGHDLMAGAQTGTGKTAAF
SLPLLQKLLPQASSSASPARHPVRALILTPTRELAIQVEESVKVYAKHTALRSLVVFGGV
DIKTQTPSLMKGVEILVATPGRLLDHVEQRTVQLGQVQMLILDEADRMLDMGFMPDLKRI
LALLPKKRQNLMFSATFSNDIKKLSEEFLTNPKLIEVARSNAASDKVTQKVYQLDKDSKD
SFLAKLLLESNSEQTIVFTKTKLTASRLARQLVREGIAADAIHGDKSQQERMQALEAFKQ
GKVTTLVATDVAARGLDIDQLPMVINFELPSAPEDYVHRIGRTGRAGASGTAISLVCPEE
EKYLKEIEKLIKREIPRETAVVAERPRERAREAREPRADSADRKPSAPRSPAPRKNQDPW
FDKPYEPSGNAEVKQSMGLARNKQKKEVAALLGGLLKRD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgagtacagaaaacattcgtttcgcagacctggggttggcgcctgaaattctcaaggcg
ctggaagagtttggctataccgtgcccacgccgattcaggcgcaggccattcccgtcgtg
ctccaagggcacgacctgatggccggtgcccagaccggtaccggtaaaaccgccgccttt
tcactccccttgctgcaaaagctattgccgcaggcgagcagcagtgcatcgccagctcgc
catccagtgcgggcgttgattctgacgccgacacgggagctcgccattcaggtagaggaa
agcgtcaaggtgtatgccaagcatacggccctgcgttcgctggtggtattcggtggcgtg
gacatcaagacgcaaacccccagcctgatgaagggtgtggaaattctggtagcgaccccc
ggtcgcctgctggatcacgtggaacagcgcaccgtgcagctcggacaagtgcaaatgctg
attctggatgaagcagaccgcatgctggacatgggctttatgcctgatctcaagcgcatc
ctggcgctgctgcctaaaaagcggcaaaacctgatgttctcggccaccttctccaatgac
atcaaaaaactgtccgaagagtttctgaccaaccccaagctgatcgaagtcgctcgcagc
aatgcagcgtctgacaaagtgacgcagaaggtgtatcagctcgacaaagacagcaaagac
agctttctggccaagctgctgctggaaagcaacagcgagcaaaccatcgtatttaccaaa
accaagctgacggcaagtcgtctggcgcggcaactggtacgcgaaggcattgcagcagat
gcgatccatggcgacaaaagtcagcaggaacgcatgcaggcgctggaagctttcaagcag
ggcaaggtaaccaccctggtagcaaccgatgttgctgcacgcggactggacattgaccag
ctgcccatggtgatcaactttgagctgccaagtgcccctgaagactacgtgcatcgcatt
ggtcgtacgggccgggctggcgcttcaggcaccgcgatttcgctggtatgcccagaggaa
gaaaaatacctgaaggaaatcgaaaagctgatcaagcgcgagatcccgcgggaaacggcc
gtagtagcagaacggcctcgcgagcgcgcaagagaagcccgcgagccacgcgccgattcg
gcagatcgcaaaccctcagctccacgctcccctgccccacgcaaaaatcaggacccctgg
tttgacaagccctatgaaccctccggcaatgccgaggtgaaacaatccatgggcttggca
cgcaacaagcagaaaaaagaagtagcagcgctattaggtggcttgctaaagcgcgactag
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