Methylovorus sp. MP688: MPQ_2026
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Entry
MPQ_2026 CDS
T01361
Symbol
nei
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mep
Methylovorus sp. MP688
Pathway
mep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MPQ_2026 (nei)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mep03400
]
MPQ_2026 (nei)
Enzymes [BR:
mep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MPQ_2026 (nei)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MPQ_2026 (nei)
DNA repair and recombination proteins [BR:
mep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MPQ_2026 (nei)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ADQ85179
LinkDB
All DBs
Position
complement(2094285..2095073)
Genome browser
AA seq
262 aa
AA seq
DB search
MQGLAPLVGQPVAKVIIRHPTLRWPIPADLVHTLPQQTLKSLTRRAKYILAQFDTGYLLL
HLGMSGRICLLAQDEPAAKHDHFDLHFADGQVLRLRDPRRFGAVLWAGADPAQHALLNVL
GPEPLESAFDGDWLYRQFRTRSAPVKNAIMDSHLVVGVGNIYASESLFRARIHPQTPANQ
LSRQACDRLAAEIKATLTDALAAGGSSLRDFFGADGNPGYFQQEYFTYARTGEACKICST
PIQNVRLGQRSTFFCPRCQPKP
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcctggccccgctggtcggccagccggtagccaaggttatcatccgtcatccc
accctgcgttggcccatcccggccgatctggtgcatacccttccgcagcagaccctgaaa
tcgctcacgcgtcgcgccaaatacattctggcgcaatttgataccggttatctcttgctg
catcttggcatgtcgggccgcatctgcctgctcgcgcaggatgagcctgccgccaagcat
gatcactttgacctgcattttgccgatgggcaggtgttgcgtttgcgggatccgcggcgt
tttggagcagtgttatgggcaggagcagaccctgcgcagcacgcgctcttaaatgtgctg
gggccggagccgctggaatccgcctttgatggcgactggctgtatcgccagtttcgcacg
cgcagcgccccggttaaaaatgccatcatggatagtcatctggtagtcggcgtgggcaat
atctacgccagtgaatcgctgtttcgcgcgcgcattcatccgcaaacgcctgccaaccaa
ctgagtcggcaggcatgtgaccgactggccgcggagatcaaggctaccctgaccgatgcg
ctggcagccggaggcagcagcctgcgtgatttctttggcgcagatggtaatccggggtat
tttcagcaggagtacttcacttacgcacgcacaggcgaggcctgcaagatatgcagcacg
cctatccagaacgtgcggctggggcagcgctcgactttcttctgcccgcgctgccagccc
aaaccctag
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