Methylovorus sp. MP688: MPQ_2104
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Entry
MPQ_2104 CDS
T01361
Symbol
csdB
Name
(GenBank) cysteine desulfurase, SufS subfamily
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
mep
Methylovorus sp. MP688
Pathway
mep00450
Selenocompound metabolism
mep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mep00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
MPQ_2104 (csdB)
Enzymes [BR:
mep01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
MPQ_2104 (csdB)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
MPQ_2104 (csdB)
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GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ADQ85255
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Position
complement(2170113..2171984)
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AA seq
623 aa
AA seq
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MTTSNFNDLSAFEPEAILAALPGDHPRMAAGLAVGRAASESGHLDVSELARIANELYAEG
FPAGAPFGSTPDVYTTTALPDSSGQAAGIRTGSPGPAAPVTSHPHASSVGLESIQLTDPS
LLPPQLDIASAAATASAGQYQPALGVPFGGDLEISRLLGSVEIPYASDLQGLLSPSSTPA
SAASAQPAVSPYYFLQGASVNSLNPGVQQGGALAPSAHPPFDANLVRKDFPILREQVNGR
PLIWLDNAATTQKPQVVIDRLAYFYQHENSNIHRAAHALAARATDAYEEARETVRRFINA
PSVNNVVFVRGTTEAINLVAKTWGKKHLREGDEILISHLEHHANIVPWQQLCQETGARLR
VAPVDDSGQVLLDEYQKLLTSRTKLVSFTQVSNALGTVTPAREMIQMAHAAGAKVLLDGA
QSVSHMRSDMTALDCDFFVFSGHKVFGPTGIGALYGKADVLAEMPAWQGGGNMIQDVTFE
KTVYHEAPAKFEAGTGNIADAVGMGAALQYVERLGIDNIARYEHDLLVYATAAMCKVPGL
RLIGTAREKASVLSFSLPGYKSEEVGAALNEEGIAVRSGHHCAQPILRRFGVETTVRPSL
AFYNTAQEVDVMVDVLQKLARTR
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgactacaagtaacttcaacgatctttcggcctttgagccggaagccattctggctgca
ttgccgggggatcatccccgcatggcggcgggcctggcagttggccgggccgcatcagag
tctgggcatctggatgtgagcgaactggcacgtattgccaatgagctttacgccgagggt
tttcccgcaggagcgccctttggcagtacgccagatgtgtacaccaccactgctttgccc
gatagctcaggccaggcagctgggattcgtaccggctcaccaggccctgctgctccagtg
acttcgcatccacatgcctcttcggtcggactcgaaagcattcagttaacggatccatcc
ttgctgccgccgcagctggatatcgccagtgcagcggcgacagcgagtgctgggcaatat
caacctgcactgggcgtgccatttggcggtgatctggagatcagtcgtttgctgggcagc
gttgagattccctatgcgagcgatctgcagggcttgctgtcaccgtcgagcacgcctgca
tcagcggcgagcgcgcagcctgcggtcagtccgtattactttttgcagggtgcatcggtc
aattcgctgaatcccggcgtgcagcagggcggcgctttggcaccttcggcgcatcctccc
tttgatgcgaatctggtccgcaaggattttccgattctgcgtgagcaggtgaatggccgt
ccactcatctggctggacaacgcggcgaccacgcaaaaaccacaagtcgttatcgaccgc
ctggcgtatttctaccagcatgaaaattccaatattcatcgggccgcgcatgcgttggct
gcgcgcgctaccgatgcgtatgaggaggcgcgcgaaacagtgcgtcgcttcatcaacgca
ccttcggtaaataatgtggtgtttgtgcgcgggacgaccgaagcgattaatctggtggcc
aaaacctggggcaagaagcatctgcgcgagggagatgagatcctgatttcgcatctggag
caccatgccaatatcgtgccctggcagcagttatgtcaggaaaccggtgccaggctgcgt
gtggcccccgtggatgatagtggtcaggtattgcttgatgaataccagaagctgctgact
tcgcgtaccaagctggtgtcattcactcaggtttccaatgcactgggtacagtgacgcct
gcccgtgaaatgatccagatggcgcatgccgctggcgcaaaagtcctgctggatggtgcg
cagtctgtatcgcacatgcgtagcgatatgacggcgctcgattgtgacttttttgtgttc
tctggtcacaaggtgtttggcccgacgggcattggtgcgctctatggcaaggcggatgtg
ctggccgagatgcccgcatggcaaggtggcggcaatatgattcaggatgtcacctttgaa
aaaaccgtttatcacgaagcgcccgccaagtttgaagctggcacgggcaatatcgccgat
gcggtgggcatgggggcggcgctgcaatatgtagagcgtctgggtatcgacaacattgca
aggtatgagcatgacttgctggtgtatgccacggctgccatgtgcaaggtgccgggcttg
cgcctgattggtaccgcccgtgaaaaggccagcgtgttgtccttcagtttgcctgggtat
aagagtgaggaagtcggtgccgccttgaacgaagagggcattgccgtgcgctccgggcat
cattgcgctcagcctattctgcgtcgcttcggtgtggaaacgacggtgcgaccatcgctg
gcgttttacaacaccgcacaggaagtcgatgtgatggtggatgtattgcaaaagctggcc
cgtacccgctaa
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