Methylovorus sp. MP688: MPQ_2279
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Entry
MPQ_2279 CDS
T01361
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mep
Methylovorus sp. MP688
Pathway
mep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPQ_2279 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mep03021
]
MPQ_2279 (rho)
03019 Messenger RNA biogenesis [BR:
mep03019
]
MPQ_2279 (rho)
Transcription machinery [BR:
mep03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MPQ_2279 (rho)
Messenger RNA biogenesis [BR:
mep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MPQ_2279 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
AAA
S1CSD-TOTE-2
Fungal_virus_P2_C
AAA_22
AAA_19
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADQ85425
LinkDB
All DBs
Position
2338225..2339484
Genome browser
AA seq
419 aa
AA seq
DB search
MHLSDLKHLPVTELVEMAIANEIEGASRMRKQDLIFALLKNKAKKGDSIFGDGTLEVLQD
GFGFLRSPDTSYLAGPDDIYVSPSQIRRFNLHTGDSIMGEIRTPKDGERYFALVKVDSVN
GEAPENTKHKILFENLTPLFPTKPLVLERDIRGEENVTGRVIDMIAPIGKGQRALLVAPP
KSGKTVMMQHIAHAITANHPDVSLIVLLIDERPEEVTEMTRSVKGEVVASTFDEPATRHV
QVAEMVLEKAKRLVEHKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALVDTGSRMDDVIYEEFKGTGNMEIHLDRRMAEKRQYPAINV
NKSGTRREELLIEKDILQKIWVLRKLLYPMDDLEAMEFLLDKLKATKNNADFFDSMRRG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgatctaaaacatcttcccgtgaccgaactggtcgaaatggcgatcgcc
aacgagattgaaggcgcgagccgcatgcgcaagcaggacctcatctttgctctgctgaaa
aacaaagccaaaaagggagacagcatttttggggatggcacgctggaagtattgcaggat
ggatttgggtttttacgttcacccgacacctcctacctggcaggtccggacgacatctat
gtttccccttcgcaaattcgacgcttcaacctgcataccggcgactccatcatgggggag
attcgcacccccaaagacggcgaacgctactttgccctggtaaaagtcgacagcgtcaac
ggcgaagccccagaaaacaccaagcacaaaatcctgtttgaaaacctcacccccctcttc
cccaccaagcctctcgtactcgaacgcgatattcgcggtgaagagaatgtgaccggccgc
gtcattgacatgatcgcgcctatcggcaaaggccagcgcgccttgctcgtggccccgccg
aaatccggcaaaacggtcatgatgcaacacattgcccacgccattaccgccaatcacccg
gatgttagcctgatcgtgctgctgattgacgaacgtccggaagaagtgacagaaatgacc
cgctcggtgaagggcgaagtggttgcctccaccttcgacgaacccgccacccgacacgtt
caggtcgcagaaatggtgctggaaaaagccaagcgcctggtcgagcacaaaaaagacgtg
gtgatcctgctggattcgatcacacgtctggcgcgcgcctacaacacggtagtaccggcc
tccggcaaggtactgactggcggcgtagatgccaatgcattgcaacgtcccaagcgtttc
tttggcgctgcccgcaatattgaagaaggcggctcgctgaccatcattgccaccgcgctg
gtcgataccggctcgcgcatggatgatgtgatttacgaagaattcaagggcactggcaat
atggaaatccacctggatcgccgtatggccgaaaaacgccaataccccgccatcaacgtc
aacaaatccggcacccgccgcgaagagttgctgattgaaaaagacatcctgcaaaaaatc
tgggtactgcgcaaactgctctaccccatggatgatctcgaagcgatggagttcctgctg
gacaaactcaaggccaccaagaacaacgccgatttcttcgactccatgcgtcgaggctaa
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