Methylovorus sp. MP688: MPQ_2317
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Entry
MPQ_2317 CDS
T01361
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
mep
Methylovorus sp. MP688
Pathway
mep02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mep00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MPQ_2317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mep03021
]
MPQ_2317
Transcription machinery [BR:
mep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MPQ_2317
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SPO22
Arfaptin
CSN4_RPN5_eIF3a
TMEM120A-B
Kebab_C
Motif
Other DBs
NCBI-ProteinID:
ADQ85462
LinkDB
All DBs
Position
complement(2377778..2379694)
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AA seq
638 aa
AA seq
DB search
MANEQNDKVNDKVETQISDADIRRTRLKSLIVLGKERGYLTYAEINDHLPDDVQDSEQID
GIIGMINDMGIQVYEETPDAEALLMSDAPPPVADEDAVEEAEQALSTVDSEFGRTTDPVR
MYMREMGTVDLLTREGEIEIAKRIEDGLKHMVQAIAACPTTIAELLAMVEKVEKDELSVD
DLVDGLIDSDVGLEEDIPVEAAEAEEEEPEDDEEDDGDEDGAKAAAISAEALAKLKEEVL
TRFAVIRQSHQKMTVILQERGSQDKEYQALQNAILEELTAFRFSAKQVEALCDQVRNMVE
EIRGHERKIMEFCVDKSGMPRAHFIKVFPGNEGNLDWLAGELTVNKPYVERLERFKHSIV
DQQQRLLDLQDRVGIPIKELKEINKQMSTGEARARRAKREMIEANLRLVISIAKKYTNRG
LQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIE
TINKMNRISRQILQETGLEPDPATLAEKMEMPEDKIRKILKISKEPISMETPIGDDDDSH
LGDFIEDMTTLAPVDAAVYASLREATKEVLESLTAREAKVLRMRFGIEMNTDHTLEEVGK
QFDVTRERIRQIEAKALRKLRHPTRSERLRSFLETGND
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgagcaaaacgataaggtcaacgataaagtagaaacgcagatcagcgatgct
gatatacgtcgtacacggcttaagtcgctgatcgttctgggtaaagaacgcggctacctg
acttacgctgaaatcaatgaccacttgccggacgacgttcaggattctgaacagatcgac
ggcattatcggcatgattaacgatatgggtattcaggtgtacgaagagacacccgatgcc
gaagcactgctgatgtcggatgctccaccgccagtggccgatgaagatgccgtggaagaa
gctgaacaggccctttctactgtagattccgagtttggccgcaccacggaccctgtgcgt
atgtacatgcgcgaaatgggtacggtagacctgctcacccgcgaaggcgaaatcgagatc
gccaagcgcattgaagacggcctcaagcacatggtgcaggccattgccgcctgtcctact
accattgccgaattgctggccatggtggaaaaagttgaaaaagacgaactcagtgttgat
gatctggtagatggtctgattgactccgacgtcggcctggaagaagacatcccggtagaa
gccgctgaagccgaagaagaagagcctgaggacgatgaagaagacgacggcgacgaagac
ggcgccaaggccgctgccatctccgctgaggcgctggccaaactgaaggaagaagtgctc
acccgcttcgccgttatccgtcagtcacaccagaaaatgacggtcatcctgcaagagcgc
ggctctcaggataaagaatatcaagccctgcaaaacgccattctggaagagctgaccgca
ttccgtttctctgccaagcaagttgaagccctgtgtgaccaggtgcgcaacatggtggaa
gaaatccgcggccacgaacgcaagatcatggaattctgcgtcgacaaatcaggcatgcca
cgtgcgcatttcatcaaggtattccctggcaatgaaggcaatctggactggctggcaggc
gagctgaccgttaacaagccatacgttgagcggctggagcgcttcaagcactccatagtg
gatcagcagcaacgcctgctggacctgcaagaccgcgtaggtatccccatcaaggaactc
aaggaaatcaacaagcagatgtccaccggcgaagcccgtgcacgtcgtgcaaagcgcgag
atgattgaggctaacctgcgtctcgtgatctctatcgccaagaaatacaccaaccgtggt
ttgcaattcctcgatctgattcaggaaggcaacatcggcctcatgaaggccgtggacaaa
tttgaatatcgccgtggctacaagttctctacgtacgccacctggtggattcgtcaggcc
attacacgctcgatcgccgaccaggcccgcaccatccgtatcccggtgcacatgatcgaa
accatcaacaagatgaaccgcatcagccgccagattctgcaggaaactggtctggaacca
gaccccgcaaccctggcagaaaagatggaaatgccggaagacaagattcgcaagatcctc
aagatttccaaggagcctatctccatggaaaccccgatcggcgacgacgacgactcccat
cttggcgactttatcgaagacatgaccacgctcgccccggtagacgccgccgtctacgcc
agcctgcgtgaagccaccaaggaagtgctggaatccctcaccgcgagagaagccaaggtg
ctgcgtatgcgcttcggtattgaaatgaacaccgaccacacgctggaggaagtcggcaag
caattcgacgtcacccgcgagcgtatccgtcagatcgaagccaaagccctgcgcaagctg
cgtcacccaacgcgctccgagcgcctgcgcagcttcctcgaaaccggcaacgactaa
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