Macrococcus epidermidis: KFV12_03720
Help
Entry
KFV12_03720 CDS
T08412
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mepi
Macrococcus epidermidis
Pathway
mepi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mepi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KFV12_03720 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mepi03019
]
KFV12_03720 (recQ)
03400 DNA repair and recombination proteins [BR:
mepi03400
]
KFV12_03720 (recQ)
Enzymes [BR:
mepi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KFV12_03720 (recQ)
Messenger RNA biogenesis [BR:
mepi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KFV12_03720 (recQ)
DNA repair and recombination proteins [BR:
mepi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KFV12_03720 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HigB_toxin
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UTH16891
LinkDB
All DBs
Position
690445..692214
Genome browser
AA seq
589 aa
AA seq
DB search
MEKVLKEYYGYETFRPGQSELIQNALDNHATLGILPTGGGKSICYQIPGILKGGLTLVIS
PLISLMKDQVDSLNASGIHAAFLNSTQKIKETKQIETGLINGDYQFLYVAPERFNQRQFI
HLLYQLNINLIAFDEAHCISKWGHDFRPSYRESIKAVMSLPHPFTIMALTATATVDVKED
ICNLLHIENQYVIETSTKRDNLKFMIDPTYQKQKRLLEFIGTHKEDSGIIYANTRKQVES
LSEVLHLEAIDHVIYHAGLNKDMKDEHQSKFVKDDVKVMIATNAFGMGIDKSNVRYVVHY
NLPQDIESYYQEAGRAGRDGLDSECLLLFGEQDIKLQQFFIETSNDENVQELKKEKLNKM
IAYTKTKQCLQSTIIHYFNPDEHLNKCGKCSNCIHEIENYNMTTEAKKILSCMIRIKQPV
HKLLITKVLHGEEDDSVTHPGYHQLSTFGLLKDYPTNAIQSFIETLLFNGYIIEQQGKLF
CHESAREILTGDKQVMTYYKHASYNERVKITTIETVDEILLKTLKDVRKRLSDDLSVPPF
TIFSDHTLQLFATKKPVSKDEMILIEGVGSYKLKHYCPEFIDAIKTYSA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtattaaaagagtactatggttatgaaacgttcagacctggtcaaagcgaa
ttgattcaaaatgcattggataatcatgcaacattaggtattttgccgacaggtggaggt
aaatcaatctgttatcaaataccaggcatattaaaaggcggattaacgcttgtgataagt
cctttgatttctttgatgaaagatcaggttgatagcttgaatgcgagtggtattcatgca
gcatttttaaattcaacacaaaaaataaaggaaacaaaacagatagaaacgggtttgatc
aacggtgattatcagtttctttatgtggcacctgaacgatttaatcaacgtcagtttatt
catttgttgtaccaattaaatatcaatttgatagcttttgatgaagcacactgtatttca
aagtggggacacgactttagaccaagctatcgcgaatcgatcaaagctgtaatgagctta
ccgcatccgtttactataatggcgcttactgcaacagcaactgtggatgtcaaagaagat
atatgtaatttattacatattgaaaaccaatatgtgattgaaacaagtacgaaacgcgat
aatttaaagtttatgatcgacccaacgtatcagaagcaaaagcgactattagaattcatt
ggaacacataaagaagattcaggcattatatatgccaatacgagaaaacaagtcgaaagt
ttaagtgaagtgctacatttagaagctattgatcatgtcatctatcatgcaggtttaaat
aaagatatgaaagatgaacatcaatcaaagtttgttaaagatgatgttaaagtcatgatt
gctaccaatgcttttggcatgggtatcgataaatccaatgtgcgttacgttgtccattat
aatctacctcaggacatcgaaagttattatcaggaagcaggtcgtgcgggacgggacgga
ttagatagtgaatgtttactcttgtttggtgagcaggatattaaattacagcagtttttt
atcgagacgagcaatgatgaaaatgtgcaggagctaaaaaaagaaaagctaaacaagatg
atcgcatatacaaagacgaaacaatgtttacagtcgaccattattcattattttaaccct
gatgaacatcttaataaatgtgggaaatgttctaactgtatacatgaaatagaaaattat
aatatgacgactgaagcaaagaaaatattaagctgtatgattcgtataaagcaaccggtt
cataaattattgattactaaagtattgcatggtgaggaagatgattcagtgacgcatccg
ggataccatcagctcagtacatttggattattgaaagattatcctacaaatgcaattcag
tcatttatcgaaacgttattattcaatggatatatcattgaacagcaaggtaaactattt
tgtcacgaaagtgctagggaaatattaaccggagataagcaggtgatgacatattacaag
cacgcatcttataatgaacgtgtaaaaatcactacgattgaaacagtggatgaaatatta
ctgaaaactttaaaggatgtgcgtaaacgtttatctgatgatttatctgtgccgccattt
acgatattttcagatcatacgttgcagttatttgccacgaaaaaaccagtgtcaaaagat
gaaatgattcttattgaaggtgtaggatcatataaattaaaacattactgtccagaattt
attgacgcaatcaaaacatattcggcatga
DBGET
integrated database retrieval system
