Macrococcus epidermidis: KFV12_06120
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Entry
KFV12_06120 CDS
T08412
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mepi
Macrococcus epidermidis
Brite
KEGG Orthology (KO) [BR:
mepi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mepi03016
]
KFV12_06120 (truB)
Enzymes [BR:
mepi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KFV12_06120 (truB)
Transfer RNA biogenesis [BR:
mepi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KFV12_06120 (truB)
Prokaryotic type
KFV12_06120 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UTH17335
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All DBs
Position
1166656..1167552
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AA seq
298 aa
AA seq
DB search
MDGIIGINKARGMTSHDVVFKLRKILKTKKVGHTGTLDPEVDGVLPICVGKATRISDYVM
QSGKRYVAEVTLGVQTATEDAHGEVIDEVVIHNNAYTEQQVDKVLSELTGRIKQIPPMYS
AVKVNGRKLYEYAREGIEIERPERIVEIYDLTRKSILYFKNNQCTFNIEIYCGKGTYIRT
LATQIAECLGTIGHMSDLTRTESGGFKLEDCITLDTLHEIPFDEINNYLQPIEVGLKHMP
HYAVDVVTSKKILFGQKLKQVSPPIEDETVMTYNDKVIAIFVPDDKHPGLIKAKKVFN
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggatggaattatcggtatcaataaagcgcgtggtatgacaagtcatgatgttgtattt
aaattgcgcaaaattttaaaaacaaaaaaagttggacatacaggtacactggatcctgaa
gtcgatggtgtattaccgatatgcgttggaaaggctacacgtattagtgactatgtaatg
caaagtggtaagcgctatgtagctgaagtaacgttaggtgttcaaactgcaactgaagat
gctcatggagaagttattgatgaggttgtcattcataacaacgcttatacggaacaacag
gtagataaagtattatcagaacttacgggtaggattaaacaaataccgccaatgtattca
gctgttaaagtaaatggccgaaagctatatgaatatgctcgagagggtattgagattgag
cgtccggaacgtattgtcgagatttatgatttaacacgaaagagcatcctttactttaaa
aataatcaatgtacatttaatattgaaatttattgtggcaaaggtacatatattagaaca
cttgctactcaaattgcagagtgtcttggcacaattggtcatatgtcagatttaacacgt
accgaaagtggtggctttaagcttgaagactgtataacgttggatactttgcatgaaatt
ccatttgatgaaattaataattatttacaaccgatagaggtaggtcttaaacatatgcca
cattatgcagttgatgtagttacctcaaaaaaaatattgtttgggcaaaagttaaaacaa
gtgagcccaccaattgaagatgaaacggtgatgacgtacaatgataaagtaattgcgata
tttgtgcctgatgataagcatccaggtttaatcaaggcaaaaaaagtatttaattag
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