Macrococcus epidermidis: KFV12_06135
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Entry
KFV12_06135 CDS
T08412
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mepi
Macrococcus epidermidis
Pathway
mepi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mepi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KFV12_06135 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mepi03019
]
KFV12_06135 (pnp)
03016 Transfer RNA biogenesis [BR:
mepi03016
]
KFV12_06135 (pnp)
Enzymes [BR:
mepi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KFV12_06135 (pnp)
Messenger RNA biogenesis [BR:
mepi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KFV12_06135 (pnp)
Transfer RNA biogenesis [BR:
mepi03016
]
Prokaryotic type
tRNA degradation factors
KFV12_06135 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
SPATA25
Motif
Other DBs
NCBI-ProteinID:
UTH17338
LinkDB
All DBs
Position
1169021..1171129
Genome browser
AA seq
702 aa
AA seq
DB search
MSQEKKVFTTEWAGRPLTIETGQLAKQANGAVLVRYGDTVVLSTATASKEPRDVDFFPLM
VNYEEKLYAAGKIPGGFNKREGRPGEDATLTSRLIDRPIRPLFPKGYRNDVQVISIVMSV
DPNNSPEMAAMIGSSMALSVSDIPFEGPIAGVNVGLIDDKFIINPNVEERERSILDLQVA
GHFDAVNMVEAGAKEVTEEKMLEAIMFGNDEIKKLVTFQKEIIAELNPVKKEFVPIETNT
EVEEAVTQQAEALNLAAAIQTQEKQEREERITAIKVQIVENFQEQGEEVIAIVNKTFDAL
VKAEVRRQITEDKVRPDGRRPDEIRPLASEVGLLPRAHGSGLFTRGQTQALSIATLGALG
EHQIIDGLGVEEEKRYMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALLQVIPDEKE
FPYTIRVVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVKKDEHYTILSD
IQGMEDALGDMDFKVAGTSKGITAIQMDIKIDGLSEDILREALEQARIGRLHIMEHMLST
ISEPRASLSPYAPKIKIIHINPDKIRDVIGPGGKKINEIIDATGVKLDIEQDGTVFIGSS
DEAMIAKAQELIENIVREAKVGEFYMSTVKRIEKFGAFVEIFPGKDALVHISQLAKERVN
KVEDVIKMGDQFLVKVTEIDKQGRVNASRKVLLEEETKKEEK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagagaaaaaagtatttacaacggaatgggctggccgtccattaacaatcgaa
acaggtcaacttgcaaaacaagcgaatggtgcagtactcgttcgatatggtgatacagtc
gtattatcaactgcaactgcaagtaaagaaccgagagatgtggatttcttcccattaatg
gtaaattatgaagaaaaattatacgctgcaggaaagattccaggaggctttaataaacga
gaaggtcgtcctggtgaagatgcaactttaacatctcgtctaattgatagaccgattcgt
cctttattcccaaaaggttacagaaacgatgttcaggttatttcaattgtaatgagtgtt
gatccgaataactcaccagaaatggcagcaatgattgggtcttctatggcactttcagtt
tctgatattccttttgaaggaccgattgctggcgtaaacgttggtttgattgatgataaa
tttattattaatccgaatgtagaagagcgcgaacgatcaattttggacttacaggttgcg
ggtcattttgatgcagtgaacatggtcgaagcaggtgctaaagaagtaaccgaagaaaaa
atgttagaagctattatgtttggaaatgatgaaattaaaaagttagtgacgttccaaaaa
gaaattatcgctgaattgaacccggttaaaaaagaatttgttcctatagaaactaatact
gaagttgaagaagctgtaacacagcaagctgaagcattaaatttagcagcagctattcaa
acacaggaaaagcaagaacgtgaagaacgtattactgcgattaaagtacaaattgttgaa
aacttccaggaacaaggggaagaagttatcgcaatcgttaataaaacgtttgatgcgtta
gttaaagctgaagtgcgtcgccaaattacagaagataaagtacgtccagatggtcgtcgt
cctgatgaaatcagaccattagcttctgaagttggtttattaccaagagcacacggttct
gggttgtttacacgaggacaaactcaagctttatctattgctactttaggtgcactaggt
gaacatcaaattatcgatggtttaggtgtggaagaagaaaaacgctatatgcatcactat
aacttccctaatttctcagttggtgaaacaggtccagtgcgtgcgccaggtcgtcgtgaa
ataggacatggtgcattaggtgagcgcgcattattacaagtgattcctgatgagaaagaa
ttcccatatacgattcgagttgtttcagaagtattagaatcaaatggttcaagttcacaa
gcatctatctgtggctctactttagcattaatggatgctggtgttccgattaaagcacca
gtagctggtattgctatgggacttgtaaaaaaagatgaacattataccattttatcggat
attcaaggtatggaagatgcattaggagatatggactttaaggtggcaggtacatctaaa
ggtattactgcgatccagatggatattaaaattgatggattatctgaagatattttacgt
gaagctttagaacaagcacgtatcggtcgtctgcatattatggagcatatgctatctaca
attagtgaaccaagagcttcactgagcccatatgcaccgaaaattaaaatcatccatatc
aatccagataaaataagagatgttattggaccaggtggtaagaaaatcaatgaaatcatt
gatgcaactggtgttaaattagatattgaacaggacggtacagtatttatcggatcaagt
gatgaggcaatgatcgctaaagcacaggaattaattgaaaatatcgtgcgtgaagcaaaa
gttggcgaattttatatgtcaacagtgaaacgtattgagaagttcggtgctttcgttgaa
atcttcccgggtaaagatgcacttgttcatatttcacaacttgcaaaagaacgtgtcaat
aaagttgaagatgtgattaagatgggcgatcagttcttagtaaaagtaactgaaattgat
aaacaaggtcgtgtgaacgcatctcgtaaagttttacttgaagaagaaactaaaaaagaa
gaaaaataa
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