Macrococcus epidermidis: KFV12_08620
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Entry
KFV12_08620 CDS
T08412
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mepi
Macrococcus epidermidis
Pathway
mepi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mepi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KFV12_08620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mepi03400
]
KFV12_08620
Enzymes [BR:
mepi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KFV12_08620
DNA repair and recombination proteins [BR:
mepi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KFV12_08620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
AAA
nSTAND3
UvrD_C
Helicase_RecD
DUF4926
NB-ARC
TsaE
RsgA_GTPase
AAA_12
AAA_16
NPHP3_N
UvrD-helicase
CbiA
NACHT
Zeta_toxin
AAA_28
T2SSE
Mg_chelatase
gpW
Motif
Other DBs
NCBI-ProteinID:
UTH15381
LinkDB
All DBs
Position
complement(1614362..1616782)
Genome browser
AA seq
806 aa
AA seq
DB search
MENATLFDRSYVKGTIVRILFQNNDNFYTVLKAEVIDTNEDFDDEVTVTGFLPQIAEGDT
YTFTGKIMLHAKYGKQLQAEKFEKDLPQSKDGIIHYLSSDLFKGVGKKTARTIVEILGED
ALNIILDDKSSLDQIPKLSQDKKDLIYNTINENQAIEKVMIQLNDWGFGPQLAMKIYQFY
KDDTIRVINESPYQLVMDIEGIGFNKADELARHIGIDNNHPERLKAALVYGMEQASLQNG
HTYIPDQILLETSFNLLTKNGSDVNPDALVNALTELCEEKKLLVEHEKNIYIPSLFYSET
KTVQVLHRLMNHQNQLKQFEQSEIMLAIGEIEQLFEVSYAEKQKEALMQAMHSKLMILSG
GPGTGKTTVVRGIVTLYAELHGLSLDYNDYDGQDFPIVVAAPTGRASKRLYESTGLEATT
IHRLIGWTRDNKPDDILENEITAKLIIIDEMSMVDTWLMFQLMKAVPNDSQIIFVGDQDQ
LPSVGPGQVFKDLIESQIIPQIELNEVYRQQEGSSIVELAHQIKRNEPFDITKRYNDRSF
IPCQTDQIPEVIEKIVTSAVNKGYDMRDIQVLAPIYRGNAGIRALNKVLQKILNPPEEKK
REMEFGDIVFRNHDKVLQLVNRPEDSVFNGDIGEIVGIFKAAENALNKDVVIVDYDGNEV
TYTKADLIEITHAYCCSIHKAQGSEFPIVIMPVVNQYYRMLQKNILYTGLTRAKQSLIFC
GDVNAFNDGIKRLGNARFTSFYQFLMDYFSTDDQKDIVKSDIDTDENNENEVFKKLPFQV
GEMTEENMHLVSPMINMGDISPYDYV
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
ttggagaacgccactttatttgatcgatcttatgtgaaaggcactattgtccgtatactt
tttcagaataacgataacttttatacggtattaaaagccgaggtaatcgatacaaatgaa
gattttgatgatgaagtgacggttacaggtttcctacctcaaattgcagaaggtgacact
tatacatttaccggaaagattatgttacacgctaagtacgggaaacaattacaggcagag
aaatttgagaaggatttacctcaatctaaagacggtatcattcattatctttctagtgac
ctatttaaaggtgtcggcaaaaaaacagcacgtacaattgttgaaatacttggcgaagat
gcattgaatattattttagatgataaaagcagtctggatcagattccgaaattatcacaa
gataaaaaagatttaatttacaatacaatcaatgaaaaccaagcgattgagaaagtaatg
attcaattaaatgattggggctttggaccacagcttgcaatgaaaatctatcagttttac
aaagacgatacgataagagtaataaatgaatcaccttatcaattagtgatggatatcgaa
ggcataggttttaacaaagctgatgaattagcccgtcatatcggtatagataacaatcat
cctgaacgattaaaagcagcattagtctatggtatggagcaggcatcattacagaatggt
catacttacattccggatcagattttactcgagacaagcttcaatctattaacaaagaat
ggttctgatgttaaccccgatgcattagtaaatgcattaactgaactttgcgaagagaaa
aaattacttgtcgaacatgaaaaaaatatttatatacctagtttattttattctgaaaca
aagaccgttcaagtattacacagattaatgaatcatcaaaatcaacttaagcaatttgaa
caatctgaaataatgcttgctattggggagattgaacagttatttgaagtgtcatatgca
gaaaaacagaaggaagcactaatgcaggcgatgcatagtaaactgatgattttatctggt
ggtcctggtactgggaaaacaacagttgtaagaggtattgtgacactttatgcagaactg
catggattaagtcttgactataatgattatgatggtcaggactttccgatcgttgttgca
gcaccaacaggtcgtgcatcgaaacgactttatgaatcaacaggattggaagcaacaacg
attcatagactgatcggttggacccgagataataagcctgatgatattctggaaaatgaa
attactgcaaagcttatcattatcgatgagatgtctatggttgacacgtggttaatgttt
caattgatgaaagcagtaccaaatgactctcagattatttttgtaggtgatcaggaccag
ttgccatccgtaggtccaggacaagtatttaaagatttaatagagtctcaaattattcct
cagattgaactgaatgaagtttatcgtcagcaggaaggctcttctatcgtagaactggca
catcagattaaacgaaatgaaccattcgatatcacaaaacgatacaatgatagaagtttt
attccatgccaaacggatcaaattccagaagttatcgagaaaatcgtaacatcagctgtt
aataaaggttacgatatgcgggatattcaggtgctcgcaccaatatatcgaggtaatgca
gggattcgtgcattgaataaagttttacagaaaattttaaatccaccagaagaaaaaaag
cgcgaaatggaatttggtgatattgtctttagaaatcacgataaagttttacagcttgtt
aaccgacctgaagatagtgtatttaacggagatatcggagaaatcgtaggtatctttaaa
gcagcagaaaatgcactgaataaggatgttgtcattgtagattatgatgggaatgaagta
acgtatacaaaagctgatttaattgaaattacccatgcatattgttgctcgattcataaa
gcgcaaggatcagaatttccgattgtcattatgcctgttgtcaatcagtactatagaatg
ctgcagaaaaatatattatatacaggattaacacgtgcgaaacagtcacttatcttttgc
ggtgatgttaatgccttcaatgatggtataaaaagattaggcaatgccagattcacttct
ttttatcaatttttaatggattattttagcacagatgatcaaaaagacattgtaaaaagc
gacatcgatactgatgaaaataatgaaaatgaagtatttaaaaaattaccatttcaggtt
ggtgaaatgaccgaagagaatatgcatctagtttcaccgatgattaatatgggagatata
tctccatatgattatgtttaa
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