Macrococcus epidermidis: KFV12_09290
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Entry
KFV12_09290 CDS
T08412
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mepi
Macrococcus epidermidis
Pathway
mepi03030
DNA replication
mepi03430
Mismatch repair
mepi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mepi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KFV12_09290
03430 Mismatch repair
KFV12_09290
03440 Homologous recombination
KFV12_09290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mepi03032
]
KFV12_09290
03400 DNA repair and recombination proteins [BR:
mepi03400
]
KFV12_09290
Enzymes [BR:
mepi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KFV12_09290
DNA replication proteins [BR:
mepi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KFV12_09290
DNA repair and recombination proteins [BR:
mepi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KFV12_09290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
UTH15508
LinkDB
All DBs
Position
complement(1749224..1752373)
Genome browser
AA seq
1049 aa
AA seq
DB search
MVVHLNIHTSYDLLHSTVKIDDLINRAKSLGQKAVAITDLNVLFGVQSFYSACIDVGIKP
IIGMEIILTDGIEDCYTVLLAKNNAGFKSLMQLSSRIQLKNLQKISTDILRQYTDQLIVI
YKQLDANQEHFVLEDADYYVSHDSTIEARRVYIDDVRYLSPDGIVDLSILNAIDDNKKIP
LETIQLKSGTKYIKSDEILLDLGISERTIQATEEIAEACNVTLEKSTHLPKYPVPDDLSS
DAYLYKLLQKQKVKFPQFDEKYEERLMYEYEVIQSMEFSDYFLIVSDLIHFAKTNDILVG
PGRGSSSGSLVSYVLGITTIDPIEHDLLFERFLNPERVTMPDIDIDFEDKERDKVIEYVI
QKYGAFNVSGIVTFGHLSMKAVMRDVGRILQFSESELKEASSILSNKSFNNLIDAYEDDT
FSSFIDYNERRKKWYQIARSLEGLPRHTSTHAAGIIIHDQLLTDYVPLLMGEEYPLTQWN
MTEVEAVGLLKIDFLGLRNLTIIHNILRSIKAQYGKTINIEQIPMDDIKVYEQLSSGDSM
GIFQLESDGIRNVLKRLKPENFNDIVAVLSLYRPGPMEQIPLYIERRHHQQTVHLPHADL
EDILSPTYGVIIYQEQIMQIANRFAGFSFGEADILRRAMSKKNHQTLLAEQEHFVSGSMK
NGYSKQDATAIYELILKFANYGFNKAHAVAYAKISYIMMYFKVHFPNIFYAATLSNQIGV
EHKTKEIIAEVKSRMINIYPADINQAGWYYKAQKTGIMMSLGMIKGVGYRSVVEIVEERK
KGPFKDIYDFCARIPKRVKSKALLEALIHVGAFDQFEQNRATLLASLDAILDVEKEAFGE
MNFLESLGLNKKKIYHYHEEMSDDQKASYELEYLGFFISRHPIESMFNELQYLPLYRMSQ
KVNDQYILLWIEGLRRVRTKKGQPMAFVQAMDGIQQMDLVVFPTVFDRYEPLIQTNKPLI
VKGKFDDKKDNQIIVNEVIKVDEFIKNIHLNAKQLFVRVPLQNAEQINKQGDIEVIQFEQ
NEMKSLGFIQRDKLDDFMSRYDKADIRLI
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
ttggtagtacatttaaatattcatacgtcatatgatctgctccattcaacagttaagatt
gatgacttgattaatcgtgccaagtcgcttggacaaaaagcagttgcgattactgactta
aatgtactatttggtgtgcagtcattttattcagcttgcattgatgtcggtattaaaccg
ataattggtatggaaatcatcctgacagacggtattgaagattgttatacagttttatta
gccaaaaataatgccggttttaaaagcctgatgcagttgtcttcacgtatacaactgaaa
aatctacaaaaaatatcaactgatatactgcgtcaatatactgaccagttaatcgttatc
tacaaacaattagatgcgaatcaggaacattttgtgttggaagatgccgattattatgtc
agtcacgatagtacaattgaagctaggcgtgtatatatcgatgatgtgcggtatttatcg
ccggatggtatcgtagatttaagcatcttaaatgcaattgatgataataaaaagataccg
ctagagaccattcaattaaagtctggaacaaagtatattaaatcagatgaaatattatta
gatttgggtatttctgagcgtaccattcaagcgacagaagaaattgctgaagcatgtaac
gttacacttgagaaatcaacgcatttaccaaaatatccggtacctgatgatttatcaagc
gatgcttatctttataaactcctacaaaagcaaaaagtaaagtttcctcaatttgatgaa
aaatatgaagaacgattaatgtatgaatatgaagtcattcaaagcatggaattttctgat
tactttttaatcgttagtgatttaatccattttgctaagacaaatgacatattggtaggt
cccggacgtggatcatcaagtggttctctcgtaagttatgtgcttgggatcactactatt
gatccgatagagcatgatttactttttgagcgttttttaaatccagaacgtgtaacgatg
ccggatattgatattgactttgaagataaagagcgcgataaagtaattgaatacgtcatt
cagaaatatggtgcattcaatgtgagcggtatcgtgacattcggtcatctgtctatgaaa
gcagtgatgcgtgacgtcggacgcatactgcagttttcagaaagtgagttaaaagaagca
agttcaatattgagtaataaaagctttaataatttaatcgatgcatatgaagatgataca
ttctcaagctttattgattacaatgaacgacgcaaaaaatggtatcagattgcaaggtcg
ctggaaggtttaccacgtcatacatcgacacatgctgcaggtatcatcattcatgaccag
ttacttacagattatgtacctttattgatgggtgaagaatacccacttacccaatggaat
atgacagaagtagaagcggttggattacttaaaattgattttcttggtttacgtaattta
acgattatacataatatactacgttctattaaggcacaatatggtaagacgataaatatt
gaacaaattccgatggatgatataaaagtttacgagcagttatccagcggagattcaatg
ggaatatttcaattagaatcagacggaatacgcaatgtgttaaaacgattaaaaccagaa
aatttcaatgatattgttgcagttttaagtctttatcgtcctggtccgatggaacaaata
ccgttatatattgaaagacgtcatcatcagcaaacagttcacttaccgcatgctgattta
gaggatatactatcacctacttatggtgtaattatctatcaggagcagattatgcagatt
gcaaatcgatttgctggatttagttttggtgaggcggatattttaagacgtgctatgagt
aagaagaaccatcagacattactggctgaacaggagcattttgtatcgggtagcatgaag
aatggttattcaaaacaagatgcgacggcgatttatgaattaatcttaaagtttgctaat
tatggattcaataaagcacatgctgtcgcgtatgcaaaaatatcatatattatgatgtac
tttaaagtgcatttcccaaatattttttatgccgcgacactcagtaatcaaattggtgtt
gagcataaaacaaaagaaattatcgctgaagttaaatcaagaatgatcaatatatatccc
gctgatattaatcaggctggctggtattacaaggcgcaaaagacaggtatcatgatgtca
ctcggtatgattaagggcgtagggtatagaagtgtggttgaaattgttgaagaaagaaaa
aaaggaccatttaaagatatctatgacttttgtgccagaattccgaaacgcgttaaatct
aaagcattgctggaagcattgatacatgttggtgcttttgatcaatttgagcaaaatcgt
gcaactttgcttgcttcacttgatgcgattcttgatgttgagaaagaagcttttggtgaa
atgaactttctcgagtctttaggactcaataagaagaaaatctatcattatcatgaagag
atgtcggatgatcaaaaggctagttatgagctggagtatcttggtttctttatttcaaga
catccaatcgaatcaatgtttaatgaactacagtatttacccctatatcgtatgagtcag
aaggtaaatgaccaatatattttactctggattgaaggattaagaagagttagaacaaaa
aaaggtcaaccaatggcatttgtacaagcgatggatggtatacagcagatggatcttgta
gtttttccaacagtattcgaccgatacgagccattgattcaaaccaataagccccttata
gtaaaaggaaaatttgatgataagaaagataatcaaatcattgtaaacgaagtcattaaa
gttgatgaatttattaaaaatattcatttgaatgcgaagcagttatttgtgagagtgcca
cttcaaaacgcagaacaaattaataaacaaggtgatattgaagtgattcagtttgagcag
aatgaaatgaaatcgttaggatttattcaaagagacaagctagatgactttatgtctcga
tacgataaagcagatattcgtctaatttaa
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