Macrococcus epidermidis: KFV12_12725
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Entry
KFV12_12725 CDS
T08412
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
mepi
Macrococcus epidermidis
Pathway
mepi00750
Vitamin B6 metabolism
mepi01100
Metabolic pathways
mepi01240
Biosynthesis of cofactors
Module
mepi_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
mepi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
KFV12_12725 (pdxS)
Enzymes [BR:
mepi01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
KFV12_12725 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
Dus
NanE
NMO
OMPdecase
IGPS
FMN_dh
TMP-TENI
IMPDH
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
UTH16113
LinkDB
All DBs
Position
complement(2380422..2381309)
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AA seq
295 aa
AA seq
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MSKIVGSDKVKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPSDIRAAGGVA
RMADPRIVEEVMNAVSIPVMAKGRIGHITEARVLEAMGVDYIDESEVLTPADEEFHLKKD
EFTVPFVCGCRDLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHLRKVNAQVRKLSVMND
DEIMTEAKLLGAPYEVLKEIKALGKLPVVNFAAGGVATPADAALMMELGADGVFVGSGIF
KSESPEKFAKAIVQATTHYQDYKLIGELSKELGAAMKGLDINKLSLEERMQERGW
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaattgtaggatcagataaagttaaacgtggtatggcagaaatgcaaaaaggt
ggcgttattatggatgttgttaacgctgaacaagctaaaattgctgaagctgctggagca
gtagctgtaatggcattagagcgtgtaccaagtgacattcgtgcagcaggtggcgtagca
cgtatggctgacccacgtatcgttgaagaagtaatgaatgcagtatctattcctgttatg
gcaaaaggccgtatcggtcatattactgaagcacgtgtattagaagctatgggtgttgac
tatatcgatgaatcagaagtattaacaccagctgatgaagagttccacttaaagaaagat
gaatttacagtacctttcgtttgcggatgccgtgatttaggagaagcagcccgtcgtatt
ggtgaaggtgcagcgatgttacgtacgaaaggtgagcctggtacaggaaatatcgttgaa
gctgtgcgtcacttacgtaaagtaaatgcacaagtgcgtaaattatctgttatgaatgat
gatgaaattatgacagaagcaaaacttttaggtgcaccttatgaagtattaaaagaaatt
aaagctttaggtaagttaccagttgtaaactttgctgcaggtggtgttgctacaccagcg
gatgcagctttaatgatggaattaggagctgacggtgtattcgtaggttctggtatcttc
aaatcagaatcacctgaaaaatttgcgaaagcaatcgttcaagcgactacgcattatcaa
gactataaattaatcggtgaactttctaaagagttaggtgcagcgatgaaaggtttagat
attaataaactttctttagaagaaagaatgcaggaacgtggctggtaa
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