Methanosarcina sp. WWM596: MSWHS_0082
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Entry
MSWHS_0082 CDS
T03852
Name
(GenBank) Ribulose-1,5-bisphosphate carboxylase, Type III
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
meq
Methanosarcina sp. WWM596
Pathway
meq00630
Glyoxylate and dicarboxylate metabolism
meq00710
Carbon fixation by Calvin cycle
meq01100
Metabolic pathways
meq01110
Biosynthesis of secondary metabolites
meq01120
Microbial metabolism in diverse environments
meq01200
Carbon metabolism
Module
meq_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
meq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MSWHS_0082
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
MSWHS_0082
Enzymes [BR:
meq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
MSWHS_0082
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Ortholog
Paralog
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
AKB16945
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All DBs
Position
100623..101909
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AA seq
428 aa
AA seq
DB search
MRRDYIDRDYSPKDTDLICEFHIEPSAGVNFEEVATHMAGESSIDSWTEISTLSPELAVK
LKPHIFYLDEESQTVRVAYSEDLFELGSVPQVLSAVAGNIFSMKIVDNLRLQDIAFPRPM
LREFKGPNFGLPGIRKLVGVQDRPLIGTIVKPKVGLTSEKHAEVAYNSFAGGCDLVKDDE
NLTDQKFNGFDRRAELTLKFAEKAEVETGEKKMYLCNITAPTCKEMTRRLNVLKNLGASY
AMIDIVPVGWTALQTLREEAEDAGLALHAHRCMHSAYTRNPRHGISMVLVAKLCRLIGLD
QLHIGTVVGKMHGEKHEVLSLRDECVLDKVPADESQHVLTQDWGGLKPMFPVASGGLAPT
MIPDLYSIFGKDVIMQFGGGIHAHPMGTVAGATACRQALDASLEGVSMQDYAKDHKELEV
AIEKWLKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagggactacatagacagggattatagcccaaaagacacagatctgatctgtgaa
ttccatatcgaaccgtcggcaggagtgaattttgaggaagttgccacccacatggcaggg
gaaagctctatagactcctggactgagatttccacattgagtcccgaacttgcagtaaaa
ttaaaacctcacattttttacctggacgaagaatcacagaccgtaagggtggcttactcg
gaagacctttttgagctgggttcggtcccccaggtgctgagtgctgttgcaggaaacatt
ttcagtatgaaaatcgttgacaacctcagactgcaggacatagccttccccaggccaatg
ctccgcgagttcaaaggtccgaacttcgggctgccggggatcaggaaacttgtgggggtg
caggaccggcctcttattgggactatcgttaagccaaaggtaggcttaacctctgagaaa
catgcggaagttgcttacaattcttttgccggaggttgcgaccttgttaaagatgatgag
aaccttaccgaccagaagttcaatggctttgacagaagggctgaactcaccctgaaattc
gcagaaaaagctgaagttgagaccggggagaagaagatgtacctctgcaacatcacagcc
ccgacctgtaaggaaatgacccggcgcttaaatgtcctcaaaaacctgggtgccagctat
gcaatgatcgatatcgtgccggtaggctggactgctcttcagactctgagggaagaggcc
gaagatgcgggtcttgcccttcatgcccaccgctgcatgcactcggcttatacccggaac
cctcgccatgggataagcatggttcttgttgccaagctctgcaggttgatagggcttgac
cagctccacataggtacggttgtcgggaaaatgcatggagaaaagcatgaagtcctgtct
ctaagggatgagtgcgtgcttgataaagtgcctgcggatgagagccagcatgtccttacc
caggactggggaggattaaagccaatgtttccggtagcgtctggagggcttgcccctaca
atgattcctgacctttactctatcttcggaaaagatgttattatgcagttcgggggtgga
atccatgcgcatccgatgggtacggtagccggagctactgcctgcaggcaagcccttgat
gcaagccttgaaggagtaagcatgcaggactatgcaaaggaccacaaagaacttgaagtt
gctatcgagaagtggcttaaaaaataa
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