Methanosarcina sp. WWM596: MSWHS_0644
Help
Entry
MSWHS_0644 CDS
T03852
Name
(GenBank) Transcriptional regulator, TetR family
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
meq
Methanosarcina sp. WWM596
Brite
KEGG Orthology (KO) [BR:
meq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meq03000
]
MSWHS_0644
Transcription factors [BR:
meq03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
MSWHS_0644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
Sigma70_r4_2
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
AKB17507
LinkDB
All DBs
Position
771251..771829
Genome browser
AA seq
192 aa
AA seq
DB search
MKEMNETNQQILHYAGNFLQCRGYNGFSYRDISRKLGIKNAAIHHYYPQKEDLVATFLEV
SRQKFTANIAQIVESGGSAREQLQYYFDYALKEFDEGKSICPPGSLMLDFEELPEKVKKQ
HLLLLDEILNWLSRVLKTGLEQGELNFSDPVEVRADAIFETLLGARQLSSIKGRKTLVRS
IALIKSDLGWRD
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagatgaacgaaaccaatcaacagatactccattatgcagggaactttttgcag
tgtcggggttataatggattcagttatagagacatttcccggaaactgggcataaagaat
gcggcaatccatcactattatccccaaaaagaagatctggttgcaacctttctggaggtc
agcaggcagaaatttactgcaaatattgctcaaatagtggaatcgggaggttcagcccgt
gagcagcttcaatattattttgattatgccctgaaagaatttgatgaaggcaaaagtatc
tgtccaccaggttcgttgatgcttgattttgaagaacttccggaaaaggtaaaaaagcag
catcttctgttactggatgagatcctgaactggctttccagagttctgaaaaccggtctg
gagcagggagagttaaatttctcagatcctgtggaggtacgtgcggatgcgatatttgaa
accttactgggtgccaggcaattatccagcattaagggaaggaaaacgcttgtcagatca
attgctctaataaaatccgatcttgggtggagggattga
DBGET
integrated database retrieval system
