Methanosarcina sp. WWM596: MSWHS_0660
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Entry
MSWHS_0660 CDS
T03852
Name
(GenBank) HTH DNA-binding protein
KO
K07728
putative transcriptional regulator
Organism
meq
Methanosarcina sp. WWM596
Brite
KEGG Orthology (KO) [BR:
meq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meq03000
]
MSWHS_0660
Transcription factors [BR:
meq03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSWHS_0660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_31
MerR
HTH_11
MerR_1
HTH_26
HTH_Crp_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AKB17523
UniProt:
A0A0E3KT61
LinkDB
All DBs
Position
complement(790486..791472)
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AA seq
328 aa
AA seq
DB search
MTKEVLIHQIIDVLSRAGFALSDRCNIRPRSFDVAARKDETLLLCKVLFNIDGLNEETAR
EMKYLAEYLGGSAIVVGAKTRDQLLEDSVVYMRYDILALSVQTLHDYFVENIQPLVSAAP
GGLYVSIEGDLLKKARTDHSMSLGTLASMVGVSRRTISKYEEEGMDASIDVVLQLEDIFR
IELARPIDILKSCGSRKPRKKAESEKEEPQAKKNVLLPEDLILNTISMLGYDVLHTAQAP
FKAISRDKSSVILTGVSEFNTTVIKRAHLMSSLSCITETQSVFIINGRSKLKSVENTVLI
EKKELDNISDSQELLDFIEERKETRDGT
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaagttctcatacatcaaattattgatgtattatcacgtgcaggttttgca
ctctctgatcgttgtaacatacgccccaggagctttgacgttgccgcacgtaaagatgaa
acactattactttgcaaggttttatttaacattgacggcctgaacgaagaaacagcaagg
gagatgaaatatcttgctgagtatctcggaggttccgctatcgttgttggagccaaaaca
agggaccagctgcttgaagacagtgttgtctacatgcgctatgatatccttgcccttagt
gtccagaccctccatgactactttgtcgaaaatatccagcctctggtttcagcagcacct
ggagggctttatgtctcaatagaaggagatctcctgaagaaggcaaggacggaccattcc
atgtctcttgggaccctggcttccatggtgggagtttcgagaaggactatcagcaaatat
gaagaagaaggcatggatgcatccattgatgtagttctccagcttgaagatattttccgg
atcgaactggcaaggcccatagatatcctgaaatcctgcgggagcagaaagccaaggaag
aaagcagagtctgaaaaggaagaaccccaggcaaaaaagaatgtacttttgccggaagac
cttatcctcaatacgatttcaatgctcggatatgatgtccttcatactgcacaggcacct
ttcaaggctatctcaagagacaagtcttcagttatccttacaggggtcagcgagtttaac
acaacagtaatcaaacgggctcatttgatgagcagcctctcctgtattacagaaactcag
tccgtattcattattaacgggcgatctaaactgaagtcagtcgaaaatacggtgctgata
gaaaagaaagaacttgacaatataagtgattctcaggagcttcttgatttcatagaggag
cgcaaggaaactcgggacggtacataa
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