Methanosarcina sp. WWM596: MSWHS_0663
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Entry
MSWHS_0663 CDS
T03852
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
meq
Methanosarcina sp. WWM596
Pathway
meq04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
meq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSWHS_0663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meq03019
]
MSWHS_0663
03009 Ribosome biogenesis [BR:
meq03009
]
MSWHS_0663
04131 Membrane trafficking [BR:
meq04131
]
MSWHS_0663
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
meq04147
]
MSWHS_0663
Messenger RNA biogenesis [BR:
meq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSWHS_0663
Ribosome biogenesis [BR:
meq03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSWHS_0663
Membrane trafficking [BR:
meq04131
]
SNARE
SNARE associated proteins
Others
MSWHS_0663
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSWHS_0663
Exosome [BR:
meq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSWHS_0663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_22
TIP49
AAA_2
AAA_14
IstB_IS21
AAA_33
AAA_7
AAA_25
AAA_28
nSTAND3
RNA_helicase
Mg_chelatase
AAA_18
Sigma54_activat
Parvo_NS1
ATPase
NPHP3_N
AAA_17
Zeta_toxin
AAA_24
DUF5906
AAA_19
PhoH
SLFN-g3_helicase
ABC_tran
bpMoxR
TsaE
NB-ARC
DUF815
Vps4_C
ResIII
Rad17
Motif
Other DBs
NCBI-ProteinID:
AKB17526
LinkDB
All DBs
Position
794555..796930
Genome browser
AA seq
791 aa
AA seq
DB search
MEEIQLKVEKAYPIDLGRGIIRLDPTALLKLQLSPGDIVEIKGKKKTTAKVWRADRQDWE
QGIVRIDNFIRQNAGVSIGEKVTITKVEAPEAKKLILALPESMTQGGPELQFGEHANEII
KRHILKRPVFRGDIIPIINSMSQPMTESLTTSQVIPLVAVETDPANTIVLITEATTIELR
KKPVQGYEKATRGVTTYEDIGGLGQEIMRVREMIEMPMKHPELFAHLNIEPPKGVILYGP
PGTGKTLIAKAVANESGASFHYIAGPEIVGKFYGESEERLRKIFEDATQDAPSVIFIDEI
DSIAPKRENVTGEVERRVVAQLLTLLDGMEERGQVVVIGATNRVDAIDPALRRPGRFDRE
IHIGVPDTKDRYEILQIHTRGMPIEKDEETRMSEPESEVEIEAGTEVEAEIEAEIEVDEA
AIDREKKEKTNLYLMYLAERTQGFVGADLLALVQEAAMRCLRESLPDLDLEKETIPPERL
EKIVVTKKNFEDALMEAEPSALREIFVEMPSVGWDDVGGLNEAKNSIVEAVEWPIKNPEK
FIQMGIKAPKGILLYGPPGTGKTLIAQAVAKESNANFISVKGPEMFSKWLGESEKAIRET
FKKARQVAPCVVFFDEIDSIAAMQGVDTDSRASERVLNQLLTEMDGLETLKDVVIIAATN
RPNLLDPAIIRPGRFDRLVYVGAPDRKGRMRIFKIHTKNTPLAEDVDLEILASITEGYVG
ADIEAVCREAVMFALRENFDIKEIEMRHFREALKKVKPTISENIAQFYEKIEEQFKGGQR
PVETAGLVGYR
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatacagttgaaggttgaaaaggcatatcctatagaccttggaagaggaatt
atccggcttgaccctacagcgctactgaaacttcagctctctcccggtgacattgtggag
ataaaggggaaaaaaaagaccacagcaaaggtatggagagcggacaggcaggattgggaa
cagggaatagtgcgtattgacaatttcatccggcaaaatgccggagtttccataggggag
aaagtgaccattacaaaggtcgaagccccggaagcaaaaaagcttattctggcacttccg
gaaagcatgactcagggtggacctgagctgcagtttggggaacatgcaaatgagatcata
aagcggcatatcctgaaaaggcctgtgttcaggggagacataattccaattataaactca
atgtctcagccgatgactgagtccctgacaacaagccaggtaattcccctggttgctgtt
gagactgaccctgccaataccattgtcctgattacggaagccacaactatcgagctccgg
aaaaaaccggtacagggctacgaaaaagcgactcgaggagtcaccacctacgaagacatc
ggcgggctggggcaggagatcatgcgcgttcgggaaatgatagagatgccgatgaagcac
ccggaactctttgcccaccttaatatagagcctccaaagggagttattctctacggccca
cccggtaccggaaaaacccttattgcaaaagccgtggcaaacgaatccggggcaagcttc
cattacattgcaggtcctgaaattgtggggaagttctacggggaaagcgaagaaagatta
aggaagatctttgaagatgcaacccaagatgcgccttcagttattttcattgatgagatc
gattccattgcccctaaaagggaaaacgtaactggggaagtggaaagacgagttgttgcc
cagctccttactcttcttgacgggatggaggaaagaggacaggtcgtggtaataggggct
actaaccgtgtggatgcaattgaccccgcactcaggagaccaggccgctttgacagggaa
attcatattggtgtgccggacaccaaagacaggtacgagatcctgcagattcacacacgg
ggcatgccaattgagaaagacgaagaaaccaggatgtctgagcctgaatctgaagtagaa
atcgaagccggaactgaagtcgaagctgaaattgaagctgaaatcgaagttgatgaagct
gcaatagacagggaaaagaaagagaagacaaacctgtatcttatgtacctggctgagagg
actcagggctttgtgggtgcagatcttctggctctcgtgcaggaagcagcaatgcgttgt
ctcagggaaagcctgccggatcttgacctcgaaaaagaaacaattcctcctgaacgcctg
gaaaagattgttgtaactaaaaagaacttcgaagatgccctgatggaagccgaaccctca
gctctgagagagatctttgttgagatgccttcggttggctgggatgatgtgggcggcctg
aatgaagcaaagaattcgattgttgaagctgttgaatggcccattaaaaacccggaaaag
tttatccagatgggcataaaagctccaaagggaatcctgctctacggccctcccggtact
ggtaagaccctgatagcacaggctgttgccaaagagtcaaatgccaatttcataagcgtc
aaagggccggagatgttttcgaaatggcttggagagtcggaaaaagcaattcgggaaacc
ttcaagaaagcaaggcaggttgctccctgtgttgtcttctttgatgagatcgactccatt
gctgcgatgcagggtgtggacacggacagccgggcttcggaaagggtactcaaccagctg
ctgaccgaaatggacgggcttgagactctcaaagacgtggtcataattgccgcaactaac
cgccctaacctgcttgaccctgcaatcatccgtccggggcgttttgacaggctggtttac
gttggggcacctgaccgtaaaggcaggatgaggatctttaagatccacacaaagaatact
cctcttgcagaggatgtggaccttgaaatccttgccagtataacagaggggtatgtgggt
gctgacatagaagcggtatgtagagaagccgtaatgtttgccctaagggaaaactttgac
atcaaagaaattgagatgaggcacttcagagaagcccttaagaaagtaaaacccacaatt
tccgaaaacattgcccagttctatgagaagatagaggagcagtttaagggaggtcagaga
ccggtagagacagctggacttgtgggatacaggtaa
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