Methanosarcina sp. WWM596: MSWHS_0899
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Entry
MSWHS_0899 CDS
T03852
Name
(GenBank) Deoxyribodipyrimidine photolyase, type II
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
meq
Methanosarcina sp. WWM596
Brite
KEGG Orthology (KO) [BR:
meq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meq03400
]
MSWHS_0899
Enzymes [BR:
meq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MSWHS_0899
DNA repair and recombination proteins [BR:
meq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MSWHS_0899
Prokaryotic type
MSWHS_0899
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Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AKB17762
UniProt:
A0A0E3NIN2
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Position
1067047..1068273
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AA seq
408 aa
AA seq
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MGAGRRHYEFMLKGLQELEEALSREKIPFVFLRGNPEQKIPEFVTEYEVGALVTDFDPLR
VKAEWVEKIIPEIEIPFFEVDAHNVVPCWEASPKQEYAAHTFRPKFYGHLSEFLEEFPEL
EPNFESIEIPSGYSIGDILSGTQETGIKSLLPEEISDKNKDPLFEPGHFKPGEKAARKVM
ESFLAERLDSYNTLRNDPTKNALSSLSPYLHFGQISAQRVVLEVEKAKSNPESKKAFLDE
ILVWKEIADNFCYYNPGYDSFESFPDWAKKSLNAHRDDRRTYIYTLEEFNAGKTHDPLWN
ASQMELLRTGKMHSYMRMYWAKKILEWSESPEKALEIAIFLNDRYELDGRDPNGYAGISW
SIGGVHDRAWREREVIGKIRYMSYEGCKRKFDVDAYIARYPVERAPEK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
ttgggggcaggaagaaggcattatgaattcatgctcaaagggctgcaggaacttgaggaa
gccctttcccgggaaaagattccttttgtctttctgcgaggaaacccggagcaaaaaatc
ccggagtttgtaacagagtatgaagtgggggctcttgttacagatttcgacccgcttcga
gtaaaggctgaatgggtagaaaaaattattcctgaaatcgaaatcccattttttgaggtt
gatgcccacaatgtcgtcccatgctgggaagcttctccaaaacaggagtatgctgcacat
acttttcggccgaagttctatgggcacctctccgagtttctggaggaatttccggaactt
gaaccgaacttcgaatctattgaaatcccatcaggctacagtataggagatattttatcc
ggaacacaggaaaccggaatcaaatccttgcttcctgaggaaatttccgataaaaataag
gatcccctttttgagcccgggcatttcaaacccggggaaaaagctgcaagaaaggtgatg
gagagttttcttgcagagaggcttgattcttacaacacgctaaggaacgacccgacaaag
aacgcgctctcaagcctttccccttaccttcatttcgggcagatctcggcgcagagggtt
gtgcttgaggtggaaaaagcaaaaagtaaccccgaatcaaagaaagctttcctggacgag
atccttgtatggaaggagattgcggataacttctgttattataatcccggatatgacagc
tttgagagctttccggattgggcaaagaagtcactcaatgcccaccgggatgaccggaga
acgtatatctacacccttgaggaattcaacgcaggaaagacgcacgacccactctggaat
gcaagccagatggaactgctccgtaccgggaagatgcacagctatatgcgtatgtactgg
gcaaaaaagattctggaatggagcgagtctccagaaaaagcccttgaaatcgcaatcttc
ctgaatgacagatatgaactggatggaagagaccccaatggctatgccggaatttcctgg
agtataggaggcgttcatgaccgggcttggagggagagagaagtgatcggaaaaatcaga
tatatgagttatgagggctgcaaaaggaaattcgatgtagatgcctatatagccagatat
cctgttgaaagggcacctgaaaaataa
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