Methanosarcina sp. WWM596: MSWHS_1718
Help
Entry
MSWHS_1718 CDS
T03852
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
meq
Methanosarcina sp. WWM596
Pathway
meq03420
Nucleotide excision repair
meq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSWHS_1718
03430 Mismatch repair
MSWHS_1718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meq03400
]
MSWHS_1718
Enzymes [BR:
meq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSWHS_1718
DNA repair and recombination proteins [BR:
meq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSWHS_1718
MMR (mismatch excision repair)
Other MMR factors
MSWHS_1718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AAA_12
AAA_22
DUF2800
Dna2
SinI
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
AKB18581
UniProt:
A0A0E3L2T5
LinkDB
All DBs
Position
complement(2109100..2112408)
Genome browser
AA seq
1102 aa
AA seq
DB search
MLEKLLATLTSKQIDAVEHTSGPLLILAGAGTGKTTTITSKIACMIKVQRVKPEKILALT
FSREAARNMEKKIHELLGQGTDVKVSTFHAFCAELIRDNSEKCGVSEQFTIFEDIDSAIL
LYKELGTSPRNAALYSSTIAKAKDLNISIDEFKAYLETKKESLLEFAEESRLEQFYTECK
INLNTFHLKDKSQQKALKNEKKNWQDFIGLYEEYRKYADFTHAWVTYEEKKRALNCLDYG
DLNRIALEFLNTCGTAELNDTYTHIIVDEFQDTNYVQFELIKHLTAREQNITVVADANQS
IYAFRGAYSNNIEDFKKQFGISEKDIVSLDVSFRSTNKILRVAHKLISQNYPEDRKSECI
LLKNCNNNKGRNVVIQETKDEGEEARKVVEQIESYIEKGIPLNEIAVLYRTHNQGRQIRQ
ALQRREIPVVVKDDADYLKQPEIKTVLSYLYILNNLTDPTPRGTEAWWRLFHYNNGLENR
DSVQIGEFIKKNKISFQEAIYHHLDEIRLSENGCNTIGKVKETIRVLGEKNLLDVSDLLL
EIYDHSGLMRHLNRLDTLKAREAFLNLRNLHEMAKNYEQFYNRELFGFIDYLEILDEMGG
NPASAKIREDDAVSLMSIHAAKGLEFRVVFVTSMAKDKFPLFRGGQEPLIPLEMMNQYRD
LFSMGLSKTALEKAIRERKKEIKLEEERRLCYVAFTRAKEDLILTLSLEYGGKEKEPSEF
LMEIGYDHWRDINTDTADRTKGDMEKEIAFDELSLSYRKDLEVKTAGLVKDNELEREKNK
CVRLLIEALDKDLEEAVHYLMVYRALRDGGCGNYLEELKQKWDLVDPTEKAGEILSKVET
RSNGLRFNPEAFGFSFSTLKLYENCPRQYELQEILRMPSRKNEDSTGVMAKGSFVHEVLE
IAVKEKVSEKQALYKIVENLHKKPEWMYVDLESTFPLFEVFWLRNKDRISNNLMVEKWFS
VPIEGFVFRGKIDRIDLLDPSTKEVEIIDYKTGKYDVSPEDRSRQLLLYAKGFEHMHPEY
RVKRLTLDMLALEKPRVFELQEDGKYGSTEGRVSPLDSRAIDAMVQTARNIAHDFEHGFK
ETEDPEICKGCGFRLYCDGVNL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaaaactcctcgcaaccctcacttccaagcaaatagacgcagttgaacacact
tcgggtcctctcttaatccttgcaggggcaggtacaggcaagaccacaacaatcaccagc
aaaatcgcctgcatgatcaaagtacagagagttaaaccggaaaagatccttgcccttact
ttttcaagggaagccgccagaaatatggaaaagaaaatccatgagcttctcgggcaggga
acagatgtgaaagtgagtacttttcatgctttctgtgccgaattgataagagataattct
gaaaagtgtggagtttcggagcagtttactatttttgaggatattgattcagctatcctg
ctttataaggaactgggcaccagtccgagaaatgcagctttatattccagcacaattgca
aaggcaaaggacctcaacatttcgattgatgagttcaaagcttatcttgaaacaaagaag
gaatccctgcttgagtttgctgaagaaagcagattggagcagttttataccgaatgtaag
atcaacttgaacacgtttcatttaaaggataaaagccagcaaaaagccctgaaaaatgaa
aagaaaaactggcaggacttcattggactttatgaggaataccgaaaatatgctgatttc
acccacgcctgggtaacatatgaagaaaaaaagagagccctaaattgccttgattacgga
gatctcaaccggattgcccttgagttcttgaatacctgcggcacagcagagcttaacgat
acctatactcacatcattgtggacgagttccaggacactaactacgtgcagttcgaactt
attaagcacctgaccgcacgggagcaaaatatcacggttgttgcggatgcgaaccagagt
atctacgcttttcggggagcgtactcaaacaatatagaggattttaaaaagcaattcgga
atttcagaaaaggatatagtgtctctagatgtgagtttcaggtccacgaacaaaatccta
agggtcgctcacaagctgatctcacagaattatcccgaagaccggaaaagcgagtgcatt
ctcctcaaaaactgcaacaataacaaaggcagaaacgtcgtcatccaggaaacaaaagac
gaaggggaagaagcaagaaaagtcgtcgagcagatcgaatcttatatcgaaaagggcatt
cccctaaacgaaattgcagtcctttatcgaacccataaccagggtaggcagatcaggcag
gcgctccagaggcgggaaatacctgtagttgtgaaagacgatgctgattatctaaaacag
cccgaaatcaaaacagtgctttcctatctctatatattaaataacctcacggacccgact
cccagaggaacggaggcctggtggcggctctttcattacaataatggcctggagaaccgt
gactccgttcagataggggagttcatcaagaaaaacaagatttcttttcaggaagctatc
taccatcatcttgatgagatcagattaagtgaaaatgggtgcaatactattggaaaggtt
aaagaaacaatcagggtccttggtgagaaaaacctgctggatgtttctgatcttttgctt
gaaatttatgatcacagtgggcttatgaggcaccttaataggctggatacgctgaaagcc
agggaagctttcctgaacctgagaaacctgcacgaaatggcaaagaattatgaacaattc
tacaacagagagctttttggcttcattgattatctggagattctggacgaaatgggaggc
aaccctgcatcggcaaagatcagggaggatgatgctgtaagcctaatgagtatccatgca
gcaaagggactcgaattcagggtcgtttttgtgaccagcatggcaaaggacaaatttcct
ctattcaggggcgggcaggaacccctgattccactggaaatgatgaaccagtacagggat
ctattttcaatgggcctgagcaaaaccgcacttgaaaaggcaatccgtgagcggaaaaaa
gagatcaagctcgaagaggaacgcaggctctgctatgtagcctttacaagagcaaaagaa
gaccttatactaactctttctctggaatatggtggtaaggagaaagaaccctctgagttt
ctaatggaaatcgggtatgaccactggcgggatataaacaccgatacagctgataggaca
aaaggtgatatggaaaaggaaatcgcttttgatgagttgagcctgtcttatcggaaagac
cttgaggttaaaaccgcaggtcttgtaaaggacaacgagcttgaaagagagaaaaacaaa
tgtgttcgactgcttattgaggctcttgataaggatcttgaagaagctgtacactacttg
atggtctacagggctctaagagatggtggatgtggaaactatctagaagaattgaagcaa
aaatgggaccttgtagatccgactgaaaaagcaggagagatcctctcaaaagtggagacc
agaagcaacggcttgagattcaatccggaggcgtttgggttcagcttttccactttgaag
ttgtacgaaaactgtccgagacagtatgaattacaggaaatcctgcgcatgccaagccga
aagaacgaagattcgacaggagtcatggcaaagggaagtttcgtgcatgaggtgctagag
attgcagttaaagaaaaagtttcggaaaagcaggcactctacaagatagttgaaaatctt
cataaaaagcctgaatggatgtatgtggatctggaatcaacttttcctctttttgaagta
ttctggctccgaaataaagaccggatttcaaataatctcatggttgaaaaatggtttagt
gttcctatcgaaggatttgttttcaggggaaagatcgaccggatcgatttgcttgacccc
tccacaaaagaggttgaaattatcgattacaaaaccggaaaatatgatgtaagccccgaa
gaccgttcaagacagcttctgctttacgcaaaaggttttgaacacatgcatccggaatat
cgggtgaagaggctcacgcttgatatgctagctctggaaaaacctcgcgtttttgagttg
caggaggatggaaagtacggcagcactgaaggccgggtaagtccccttgacagtagggca
attgacgctatggtccaaactgcacgaaatattgcccatgattttgagcatgggtttaag
gagacagaggatcctgaaatctgcaaggggtgtgggttcaggttgtattgtgatggtgtt
aatctgtaa
DBGET
integrated database retrieval system
