Methanosarcina sp. WWM596: MSWHS_2299
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Entry
MSWHS_2299 CDS
T03852
Name
(GenBank) Geranylfarnesyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
meq
Methanosarcina sp. WWM596
Pathway
meq00900
Terpenoid backbone biosynthesis
meq01100
Metabolic pathways
meq01110
Biosynthesis of secondary metabolites
Module
meq_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
meq00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MSWHS_2299
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
MSWHS_2299
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
meq01006
]
MSWHS_2299
Enzymes [BR:
meq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
MSWHS_2299
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
MSWHS_2299
2.5.1.29 geranylgeranyl diphosphate synthase
MSWHS_2299
Prenyltransferases [BR:
meq01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
MSWHS_2299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
FA_synthesis
Motif
Other DBs
NCBI-ProteinID:
AKB19162
LinkDB
All DBs
Position
complement(2806278..2807243)
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AA seq
321 aa
AA seq
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MMLIDEIKKRSSHVDAAIDELLPITRPEELYKASRYLVDAGGKRLRPAVLILAAEAVGSD
LKSVLPAAVAVELVHNFTLIHDDIMDKDNIRRGMPAVHVKWGEAGAILAGDTLYSKAFEI
LSKVDNEPVRILKCMDVLSKTCTEICEGQWLDMDFETRDRVTELEYIEMVEKKTSVLYAA
TAKIGALLGGASDEVAEALSEYGRLIGIGFQMYDDVLDMVAPEEVLGKVRGSDLMEGKYT
LIVIDAFSKGVKLDIFGKGAATLEETEAAVRTLTECGSIDYVKNLAISYINQGKAKLDVL
RDCPEKELLLQIADYMIARNY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttattgatgagatcaaaaagagaagttcccatgttgatgctgcaattgacgaa
ctacttccaataacccgtcccgaggagctgtacaaagcttctcgctatctcgtggacgcc
ggcggaaagcgtcttcgtccggcagtccttatcctggcagcagaagctgtcggctccgat
ctcaagtctgttttgcccgcagcagtggctgtggaacttgtacataatttcactctgatc
catgacgacattatggataaggacaatatccgcaggggaatgcctgcagtccatgttaaa
tggggtgaagccggggccatccttgccggagacaccctttactccaaagcgttcgagatc
ctgtcaaaggttgataacgaacctgtaaggattttaaagtgcatggatgtcctctcaaag
acctgtaccgaaatctgtgaagggcagtggcttgacatggacttcgaaacaagggacagg
gtaacggaacttgagtacatcgaaatggtggaaaagaagacctctgtcctctatgcagcc
acagccaaaatcggtgctctcctcggtggagcctccgacgaggttgccgaggccttatcc
gaatatggtcgcctcatagggatcggtttccagatgtacgatgacgtcctggacatggtc
gctcctgaagaagtgctcggaaaggttagaggcagcgacctcatggaaggaaagtacacc
ctcattgtcattgacgccttcagcaaaggcgtaaaactggacatcttcgggaaaggggca
gccactcttgaagaaaccgaagcagctgtccggactctgaccgaatgcggatccatcgat
tacgtgaaaaatcttgcaatctcatatatcaatcaaggaaaggcaaaactggatgtcctc
agagactgtcctgaaaaagaacttctcctccagattgctgactatatgattgcaaggaac
tactga
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