Methanosarcina sp. WWM596: MSWHS_2747
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Entry
MSWHS_2747 CDS
T03852
Name
(GenBank) hypothetical protein
KO
K07730
putative transcriptional regulator
Organism
meq
Methanosarcina sp. WWM596
Brite
KEGG Orthology (KO) [BR:
meq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meq03000
]
MSWHS_2747
Transcription factors [BR:
meq03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSWHS_2747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7839
MarR_2
HTH_24
HTH_Crp_2
MarR
HTH_45
HTH_3
Mnd1
HTH_11
Rrf2
DUF7343
Fe_dep_repress
HTH_IclR
wHTH-PRTase_assc
HTH_27
HVO_A0261_N
HTH_28
HTH_PafC
HTH_36
HTH_13
HxlR
HTH_5
GntR
HTH_10
Phage_rep_O
NirdL-like_HTH
TrmB
B-block_TFIIIC
TetR_C_7
WHD_MCM8
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AKB19610
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Position
complement(3333591..3334379)
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AA seq
262 aa
AA seq
DB search
MIKILQTKSGVTKFQVLIEIAAHQPNVRQKEIAAKIGITPQAVSEYIKELVNDGLIVTEG
RVRYRITKEGVEWVLENAAEMKRYARFVMEDIISHVSTWTAITKEEVKENQQVYLKMDHG
LLYVSSTEKTGASGTVISDASRGDDVGVTSLKGLIDLENASITICKVPRVERGGSRKVDL
ERLKMLANSKPYIAAIGVESLIALRKIDIRPNVMFGTNESVIEAAYHGLSSLVVSVDEQV
SALLNRLETENLEYELVDLTVE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaatcctccagaccaagagcggagtcaccaaatttcaggtccttatcgagatt
gccgcccatcagcccaatgtcaggcaaaaggagattgccgcaaagataggaataacccca
caggctgtttccgaatacattaaggagcttgtaaatgacgggcttattgtaaccgagggc
cgcgtcagatacaggataacaaaagaaggcgtagaatgggtccttgaaaacgccgccgaa
atgaagcggtacgcccgctttgtcatggaggacataatcagtcatgtctcaacctggaca
gccatcacaaaagaggaagtcaaagaaaaccagcaggtttacctgaaaatggatcacgga
ctcctctatgtaagcagcacggaaaaaacaggcgcatcgggcactgtcatatccgatgcg
tctcgaggagacgatgtgggagtaaccagcctcaagggccttatagatctggaaaacgca
tccatcacgatctgcaaggttcccagggttgaacgcggagggtcgagaaaagtggatctt
gagcgcctgaagatgctggcaaactcaaaaccctatatcgctgcaataggtgtagaatcg
ttaattgctcttcgcaagatcgacatacgccccaatgtcatgttcgggacaaacgaatcc
gttatcgaggctgcataccacggactttcatccctggtggtttcagtagacgaacaggtc
tctgctctcttgaacaggttagaaaccgagaaccttgagtacgaacttgttgacctgaca
gtcgagtaa
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