Methanosarcina sp. WWM596: MSWHS_2857
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Entry
MSWHS_2857 CDS
T03852
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
meq
Methanosarcina sp. WWM596
Brite
KEGG Orthology (KO) [BR:
meq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meq03400
]
MSWHS_2857
DNA repair and recombination proteins [BR:
meq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSWHS_2857
Archaeal homologous recombinant proteins
MSWHS_2857
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Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
DUF7120
Motif
Other DBs
NCBI-ProteinID:
AKB19720
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Position
3474524..3476377
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AA seq
617 aa
AA seq
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MVQETRILHTADTHLGYRQYHNEVRRQDFFKAFEVVIQDAVDMQVDAVVHAGDLFDSRNP
TLEDLLETMNLLFRLKAANIPFLAIVGNHESKQNTQWLDLFEEMGLAVRLGKTPQLVGNT
AIYGIDSVPKSKISLYDYSGFEVPESLPENCRNLLVMHQTVQPFPYADWDCAETLENLPF
KVDAILLGDYHKYEKIKVGKTDTWATYPGSTERNSASESEPRSYNIITLSGEGLEISKRS
IPTRNFLFIPAKLDGEEKPYEQIFSAINEHLEELPDSVVFLDISGDPGPVLSFSEIEEYL
LSKGALVARVKDLRIKEALIEEVVKVTFSDPDHAVAEEIRRLSLNDGGLIVDEIIRNPGV
PRSRVDEETESRLSGLIEALDFKDPDFRIEIPVSPVSSAMIEEPEEFKPAGADGQVKNLE
SAGGAEFAAETAKRSKILRAFARIESSESLNNSFKGPDEDPEPLNKACESLEESPEPLHA
PVICENTESVGASVEIEMPKNAANSSAEESSPYETSQKTSGASIESPAEIPGEGGERAEL
GIDAGNKTEAEEKEAGKLSESGGKTSSEKDGEGKTEKPEDEKPVQMSAKSGKSVKQSHRK
GKEKTAVPKQYNLGDYL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggttcaggaaacaaggatactccacacagcagacacgcacctgggataccggcagtac
cacaacgaggtacggaggcaggacttttttaaagcttttgaggtagtcattcaggacgcg
gttgacatgcaggttgatgctgtcgtgcatgctggagacctttttgattcgaggaacccg
acccttgaagaccttcttgagactatgaacctcctgttccggttgaaggctgcaaatata
ccgtttcttgcgattgtcgggaatcacgagagcaagcaaaatacccagtggcttgacctc
tttgaggaaatgggactcgcggtaaggctcgggaaaacaccccaactggtaggaaataca
gcaatatacgggatcgacagcgttccgaagtcaaagatttctctttacgattattcaggg
tttgaagttccggaatccctgccggaaaactgcaggaaccttcttgtaatgcaccagacc
gtgcagcctttcccgtatgcggactgggactgtgctgagacgcttgaaaaccttcccttt
aaggttgatgcaattctcctcggggactaccacaagtacgaaaaaataaaggtcgggaag
accgatacctgggctacatacccgggcagtaccgaacgcaatagtgcatctgaaagtgag
ccccgttcttacaatattatcactctttccggggaagggctggaaatcagtaagcgtagc
atccctacccgaaattttctgtttattccggcaaaacttgatggggaagaaaagccttat
gaacagatattttctgccattaatgagcacctcgaagagcttccggactcggttgtgttc
ctggatatctcaggagacccaggtccagtcctttccttcagtgagattgaagaatacctg
ttgagcaaaggagcgctggtggcaagggtcaaagacctcaggataaaagaagctcttatc
gaagaggttgtgaaagtcacattttctgaccctgaccatgcggttgccgaagaaatacgc
aggctgagcttaaacgacggtgggctgatagtcgatgagattatccggaatccgggtgtg
ccaaggtcaagagtggacgaagagaccgagagccggctttcgggtttgattgaagcactg
gatttcaaagacccggatttcaggatagagattcctgttagccctgttagctctgccatg
attgaagaacctgaagaattcaaaccagcaggcgcagatggacaggttaaaaacttagag
tccgccggaggggctgaatttgcggcggaaactgccaaaagatctaaaattctgagggct
tttgcaagaattgaaagctctgaatctctcaataatagttttaaaggccctgatgaggat
cctgaacctcttaataaggcatgtgaatctcttgaggaaagtcctgaacctcttcatgcc
cccgtaatatgtgaaaatactgaatctgtaggggcatctgtagagattgaaatgcccaaa
aatgctgctaattcttcggctgaagaatcctccccctatgaaacttctcagaaaacttca
ggggcttcgatagaatctcctgcagaaatccctggagaaggtggagaaagagctgagctc
gggatagatgccggaaataaaaccgaagccgaagaaaaagaggctgggaagctttccgaa
tctgggggaaaaaccagttcagaaaaagatggagagggcaaaaccgaaaaacctgaggat
gaaaaaccagttcagatgtcggctaaatccggaaaatcggtaaaacaaagccatagaaaa
ggaaaagaaaagactgctgtgcccaaacagtataaccttggtgattacctgtga
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