Methanosarcina sp. WWM596: MSWHS_2923
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Entry
MSWHS_2923 CDS
T03852
Name
(GenBank) Translation elongation factor 1 alpha subunit
KO
K03231
elongation factor 1-alpha
Organism
meq
Methanosarcina sp. WWM596
Pathway
meq03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
meq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MSWHS_2923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meq03019
]
MSWHS_2923
03016 Transfer RNA biogenesis [BR:
meq03016
]
MSWHS_2923
03012 Translation factors [BR:
meq03012
]
MSWHS_2923
04131 Membrane trafficking [BR:
meq04131
]
MSWHS_2923
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
meq04147
]
MSWHS_2923
Messenger RNA biogenesis [BR:
meq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
MSWHS_2923
Transfer RNA biogenesis [BR:
meq03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
MSWHS_2923
Translation factors [BR:
meq03012
]
Eukaryotic type
Elongation factors
MSWHS_2923
Membrane trafficking [BR:
meq04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
MSWHS_2923
Exosome [BR:
meq04147
]
Exosomal proteins
Proteins found in most exosomes
MSWHS_2923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
SpoIVA_ATPase
Septin
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
AKB19786
UniProt:
A0A0E3L3H6
LinkDB
All DBs
Position
3559896..3561164
Genome browser
AA seq
422 aa
AA seq
DB search
MAADKPHMNLAVIGHIDHGKSTFVGRLMFDAGAVAPHIIDKFREEAKQKGKESFAFAWVM
DSLKEERERGITIDIAHKRFDTDKFYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPD
GVMAQTKEHIFLSRTLGINQLIVAINKMDAVEYSEARYKEVVEQVSGILKMIGFKPSEIP
FIPTSAFYGDNIIKLSDKTPWYKGPAIMEALNNLKEPEKPSTLPLRIPVEDAYTISGIGT
VPVGRVETGVMKKGDKVVFMPGGVSGEVKSIEMHHEEIPQAFPGDNIGWNVRGIGKNDVR
RGDVCGPVENPPKVADEFVGQIVVLQHPSAITAGYTPVFHAHTSQTACQLIALNRKLDPK
TGQVKEENPTFLKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVK
QK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagacaaaccgcacatgaatttagcagtgattggtcacattgaccacggaaag
tcaacattcgtaggacgcttaatgttcgatgcaggggctgtagctccacacatcattgat
aagtttagagaagaagcaaagcagaagggtaaggaatctttcgccttcgcctgggttatg
gactctcttaaggaagagcgtgaaagaggtatcacaattgacatcgctcataagagattc
gacacagacaaattctacttcacagtcgtggactgtcctggccaccgtgacttcgtaaag
aatatgattacaggtgcttcccaggctgacgctgcagtcctcgtcgttgcagcccctgat
ggggtcatggctcagaccaaggaacacatcttcctttccaggacccttggtatcaaccag
cttatcgttgcaatcaacaagatggatgcagtagaatacagcgaagccagatacaaggaa
gtcgttgagcaggtatccggcattctgaaaatgatcgggttcaagccaagcgaaatcccc
ttcataccgacctctgcattctacggtgacaacatcatcaaactcagtgacaagactccc
tggtacaaggggcccgccatcatggaagccctcaacaacctcaaagagcctgaaaaacca
tccactctccccctcaggatccctgtcgaagatgcatacaccatctccggtatcggaact
gtccctgtaggcagagtcgaaaccggtgtcatgaaaaagggtgataaggtcgtcttcatg
cccggaggagtatccggtgaagttaagtccattgagatgcaccacgaagaaatcccacag
gcattccccggagacaacatcggatggaacgtccgtggtattggcaagaacgacgtccgt
agaggagacgtctgtggtcctgttgaaaacccgccaaaggttgctgacgagtttgtagga
cagattgtggtcctccagcacccctccgcaattactgccggttacactccggtcttccac
gctcatacctcccagaccgcatgccagcttattgctcttaacaggaagctggacccgaag
actggtcaggtaaaggaagaaaatccgaccttccttaaggcaggagacgcagcaatcgtt
accatcaaaccaacaaagccgatggttatcgagcccgtaaaagaaattccacagctcggc
aggttcgctatccgcgacatgggtatgacaattgccgccggtatgtgcatgagtgttaag
cagaaataa
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