Methanosarcina sp. WWM596: MSWHS_2945
Help
Entry
MSWHS_2945 CDS
T03852
Name
(GenBank) radical SAM domain protein
KO
K22226
Fe-coproporphyrin III synthase
Organism
meq
Methanosarcina sp. WWM596
Pathway
meq00860
Porphyrin metabolism
meq01100
Metabolic pathways
meq01110
Biosynthesis of secondary metabolites
meq01240
Biosynthesis of cofactors
Module
meq_M00847
Heme biosynthesis, archaea, siroheme => heme
Brite
KEGG Orthology (KO) [BR:
meq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
MSWHS_2945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
SPASM
Fer4_ETF_QO
B
Motif
Other DBs
NCBI-ProteinID:
AKB19808
UniProt:
A0A0E3KVL6
LinkDB
All DBs
Position
complement(3584688..3585887)
Genome browser
AA seq
399 aa
AA seq
DB search
MIGISKLYCGTVEPSDALRYGRDSKRLPSHLLQFSKDKKPVVVWNMTRRCNLKCVHCYAQ
AKDMEFKDELSTEEGKALIDDLAAFGSPVMLFSGGEPTMRKDLPELAAYAREKGMRAVIS
TNGTLIDKPLAKKLKEVGLSYVGISLDGIRETNDRFRGMQGAFDAALRGLHNCQEEGIKV
GLRFTINKQNVMDIPAIFDLLEEEKIPRICFYHLVYAGRGSKMVNEDLSLEESRQAVDLI
AERTKALHEKGFPAEVLTVDNHCDGPYIYLKLLKENPERAAEVFELLSMNQGNSSGIGFG
CVSWDGSVHADQFWRHYSFGNVRERPFSEIWTDLSDELMAGLKNRKPLIQVNADRCAHCK
WFDICNGNFRVRAEAVYGNIWADDPACYLTKEEIGYDEA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgataggcatttcaaaactttactgcggaaccgtggaaccttctgatgcccttcgctat
ggaagggattcaaagaggcttccctctcaccttctgcagttttcgaaagataaaaaaccg
gtagtggtctggaacatgacccgccgctgcaacctgaaatgcgtccactgttatgcccag
gcaaaggacatggagttcaaagatgagctttcaaccgaggaaggaaaagcccttatcgac
gaccttgcagcttttggctctcctgttatgctcttctccgggggcgaacccacgatgcga
aaagacctgccggagcttgcagcctatgccagagaaaaagggatgagagccgtgatttca
acaaacgggactcttatagataaacctcttgcaaaaaagttaaaagaggttgggctttct
tacgtaggaatctcccttgacggtataagagagacaaatgacaggttcaggggcatgcag
ggagcattcgatgcagctctaaggggtctgcataactgccaggaagaaggcataaaagtc
ggactccgttttaccatcaacaagcagaacgtaatggacatccctgcgatatttgacctc
ctggaagaagaaaaaatccccaggatctgcttctatcaccttgtctatgcaggcagaggt
tcgaagatggtgaatgaagacctttccctcgaagaatcaagacaggctgtggacctgatt
gctgagaggacaaaggccctccacgaaaaaggcttccctgcggaagtcctgaccgtggac
aaccactgcgatggcccgtacatctacctgaagctactaaaagaaaatcccgaaagggca
gcagaagtgtttgaactcctttccatgaaccagggcaactcctcaggaataggtttcggc
tgcgtttcctgggacggctccgtgcacgccgaccagttctggaggcactactccttcgga
aacgtccgcgaaagacctttcagcgagatctggacagacctttctgatgaactgatggcc
gggctcaagaaccggaaaccccttatccaggttaatgctgaccgctgcgcccactgcaaa
tggttcgacatatgcaacggaaacttccgagttcgagccgaagccgtgtacggaaacatc
tgggcagacgaccctgcctgctacctcacaaaagaagaaatcggatacgacgaagcctga
DBGET
integrated database retrieval system