Methanosarcina sp. WWM596: MSWHS_2948
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Entry
MSWHS_2948 CDS
T03852
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
meq
Methanosarcina sp. WWM596
Brite
KEGG Orthology (KO) [BR:
meq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meq03016
]
MSWHS_2948
Enzymes [BR:
meq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
MSWHS_2948
Transfer RNA biogenesis [BR:
meq03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
MSWHS_2948
Prokaryotic type
MSWHS_2948
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AKB19811
UniProt:
A0A0E3L3I1
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All DBs
Position
3588065..3588982
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AA seq
305 aa
AA seq
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MLRITFLGTGGSLPTRNRNPSAVMVNREGELILFDCGEGTQQQMMRAKTGMMSLSSIFVS
HFHADHFLGIPGLIQTMSFLGRKEPLTIYGPEGTKEFTELFKALGYFNLKYEIRGVKLSP
GDTVEGESYVIRALETEHSIPSLGYSLIENPRPGRFNREKAVAIGVPPGPLFSKLQKGKP
VEVGGKVVRPEEVMGIPRPGRTIVYSGDTRPCEAVLEASRDADLLIHDGSFADEMADWAE
ESMHSTAGEVAALAKEAGVRKLVLTHISSRYTDDVEPILRDSKKVFENVIVADDLMELEI
PYRPE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcataacttttcttggcactggagggtccctcccgacccgtaacagaaatccg
tcagcagtaatggtcaatagagaaggggaacttatactctttgactgtggagaaggcacc
cagcagcagatgatgcgggcaaaaacggggatgatgagtctgtcctccatttttgtcagt
cattttcatgccgatcattttctcggaattcctggcctcattcaaactatgtcttttctg
ggcaggaaagagccgttgacgatctatggtcctgaagggacaaaagagtttaccgagctc
tttaaggcccttggttattttaaccttaaatacgaaatccggggtgtgaaactgagccca
ggagacactgtagaaggggaaagctatgtgatccgggctttagagaccgaacacagcatc
ccgagtcttggctattcccttatcgaaaacccccggcccggacgttttaaccgggaaaag
gcagtcgcgattggcgtccctcctggtccccttttttcaaaactgcaaaaaggaaagcct
gtagaagtgggcggaaaggttgtaaggcccgaagaagtaatgggaattcccaggcctgga
aggacaattgtgtacagcggagataccaggccctgtgaagccgtgttggaggcgagcagg
gatgccgacctccttatccatgacggcagtttcgctgatgagatggcagactgggcggaa
gaatccatgcattcgacagcaggtgaggttgcagcccttgcaaaagaagccggagtcagg
aaactggtccttacccatataagttcgcgttatactgatgatgtggagcctatcctgaga
gactcaaaaaaagtgtttgaaaatgttattgtagccgatgacctgatggaacttgagata
ccatacagacctgagtga
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