Methanosarcina sp. WWM596: MSWHS_3209
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Entry
MSWHS_3209 CDS
T03852
Name
(GenBank) tRNA pseudouridine 55 synthase Archaea
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
meq
Methanosarcina sp. WWM596
Brite
KEGG Orthology (KO) [BR:
meq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meq03016
]
MSWHS_3209
Enzymes [BR:
meq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSWHS_3209
Transfer RNA biogenesis [BR:
meq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSWHS_3209
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
THUMP
Motif
Other DBs
NCBI-ProteinID:
AKB20072
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Position
3905110..3906405
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AA seq
431 aa
AA seq
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MDVLEISKKILHEGPVCDHCMGRQFAKLSTGLSNRERGQAMKLALVLEGDRIYKSENDDS
LLKELVPCSALARKTLRIEGEDEQCWVCLDQFKKLDEWADKAAKALEGLEYSTFLVGTKV
SGLLSENEEMLWAEAGTAYAEQLKTELNREVGKRIAEKVDKEVDFENPDIVITLDLATTN
FELQVRSVYVYGRYLKKVRGIPQTRWPCRKCKGRGCESCGFTGKQYPESVDELIKGPVIE
TFEAVDTAFHGSGREDIDALMLGNGRPFVVEAKSPVKRMADLEMLTALINENAAGKVEVR
DLRFVEKSMIEILKSSKADKTYKLKVTFKEPVSEEKLKSCLESLSGTEIAQQTPKRVVHR
RADLVRKRHVHSITLDELTDNGHAHITVNCEGGLYVKELISGDEGRTNPSLTGLLGVPAL
VEDLDVVNVEI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatgtacttgaaatttcaaaaaagattctgcacgaaggtcctgtctgtgaccactgc
atgggccgtcagtttgcaaaattatccacaggcctcagcaacagagagcgcgggcaggca
atgaaactcgcccttgtccttgaaggggaccgcatttacaaaagtgaaaatgatgattct
ctcttaaaggaacttgttccctgcagtgcccttgcaaggaaaactctcagaatcgagggt
gaagacgagcagtgctgggtctgccttgaccagttcaaaaaactggatgaatgggcagat
aaagctgcaaaagccctcgaagggcttgagtactccaccttcctggtggggacaaaggtc
agcgggctcctgagtgaaaacgaagagatgttatgggctgaggcagggactgcctatgcc
gagcagttaaagaccgaacttaaccgggaagtaggcaagcggattgcagaaaaggttgac
aaagaagtggattttgaaaacccggatattgtgatcacccttgaccttgcaacaaccaac
ttcgaacttcaggtccgttcagtatatgtttacggacgctacctcaaaaaagttcgcgga
atcccgcagacccgctggccctgcaggaaatgtaagggtagaggctgtgagagctgcggg
tttaccggcaaacaatatccagaatccgtagatgagcttatcaaaggtcccgtcatcgaa
acatttgaggctgttgatacggcttttcacggttcgggaagggaagatatagatgccctg
atgctcggaaacggcagaccctttgtggtagaagcaaaatcccctgtaaagcgcatggct
gaccttgaaatgcttactgccttaattaatgagaatgctgcaggaaaagttgaggtaagg
gatcttcgctttgtagaaaaaagcatgattgagatcctgaagagctcaaaggcggataaa
acttataagcttaaagttacatttaaagagcctgtttcagaggaaaagcttaaatcctgc
cttgagtctttgagtggtacggagatcgctcagcagactccaaagcgtgtggttcacagg
cgggcagatcttgtccggaaaaggcacgtgcacagcattacgcttgacgagctgacagat
aacggtcatgcccacataaccgtaaactgtgaaggtgggctgtacgtcaaagagctgatt
tccggggacgagggcaggacaaacccgagcctgacagggcttttaggagtcccggcgctt
gtggaagatcttgatgtagttaacgtcgaaatttaa
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