KEGG   Methanosarcina sp. WWM596: MSWHS_3320
Entry
MSWHS_3320        CDS       T03852                                 
Name
(GenBank) DNA polymerase sliding clamp protein PCNA
  KO
K04802  proliferating cell nuclear antigen
Organism
meq  Methanosarcina sp. WWM596
Pathway
meq03030  DNA replication
meq03410  Base excision repair
meq03420  Nucleotide excision repair
meq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:meq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSWHS_3320
   03410 Base excision repair
    MSWHS_3320
   03420 Nucleotide excision repair
    MSWHS_3320
   03430 Mismatch repair
    MSWHS_3320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:meq03032]
    MSWHS_3320
   03400 DNA repair and recombination proteins [BR:meq03400]
    MSWHS_3320
DNA replication proteins [BR:meq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSWHS_3320
DNA repair and recombination proteins [BR:meq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSWHS_3320
   MMR (mismatch excision repair)
    Other MMR factors
     MSWHS_3320
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    MSWHS_3320
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AKB20183
UniProt: A0A0E3KVY6
LinkDB
Position
4019961..4020698
AA seq 245 aa
MFKAAINAELLKDAIAALAVIVDEVRFKIKPEGISVKAVDPANVAMGIFELGSSAFDEYS
ADECEIGIDLNKITDLLGIAERSDTVRMELEEGSNKLLIDVGGLSYTLSLLDPSTIRAEP
RVPQLELPAKVVLNGADLRRAVKAAEKISDHMLMGVSGDTFYIEAKGDTDKVRLEMGRDQ
LIDLKAGEACSLFSLDYLTDIVKPTNKVNEVTLSLGRDFPVLIDFEIANGAGRISYLLAP
RIESD
NT seq 738 nt   +upstreamnt  +downstreamnt
atgttcaaggcagcaattaatgcagagcttctgaaagacgcgattgccgcactggctgta
attgtagatgaggttcgattcaagattaaacccgaaggtatttcggtaaaagcagttgac
cctgctaacgttgcaatgggaatttttgagcttggatcatcggcttttgatgaatacagc
gctgatgagtgtgagatcgggattgacctgaataagattaccgaccttctgggaattgcg
gaaaggagcgatacagtccgaatggaacttgaagaaggaagcaataaactcctgattgat
gtaggagggctgtcctatactctttctcttctggatccttcgacaatccgtgcagaaccc
agagttccccaactcgagctgcctgccaaagttgtcctgaatggtgcagacctcaggcgt
gccgtaaaagccgcggaaaaaataagcgaccatatgctcatgggagtttctggcgatact
ttctatatagaagctaagggcgataccgataaagtccgcctggagatgggcagagaccag
ttaattgaccttaaagcaggtgaagcctgttccctcttctcccttgactacctgacagat
atagtcaagcccacaaacaaggtaaatgaggttactctctctcttggcagagatttccct
gtcctgattgactttgaaattgcaaacggtgcaggaagaatatcttacctcctggctccg
agaatagaatcagactaa

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