Methanosarcina sp. WWM596: MSWHS_3337
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Entry
MSWHS_3337 CDS
T03852
Name
(GenBank) ATP-dependent RNA helicase, EIF-4A family
Organism
meq
Methanosarcina sp. WWM596
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
RNA_helicase_helical
DEAD
ResIII
HHH_5
HHH_2
HHH
5_3_exonuc
Cas3-like_C_2
HHH_8
HHH_3
PhoH
UPF0758_N
Motif
Other DBs
NCBI-ProteinID:
AKB20200
UniProt:
A0A0E3NQV7
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Position
4039145..4041565
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AA seq
806 aa
AA seq
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MKHPLIKPETVEQRLYQLNLAGKALEGSSLVVLPTGLGKTIIALFVIVSRLQRFGGKALI
LSPTKPLVDQHAAFFKKVMTLPEEEILAFTGSIAPAEREKLWARGKLIVSTPQVIENDLL
TKRISLEDVSHITFDEAHRAVGNYAYTFIAEKYFESAKNPHVLGITASPGSSDEKIAEVC
QALHVENVAVKTEKDRDVRPYVQEKEIEWLQVLLPAEMAEIRGYLEKIFDDRLKTIRELG
FSAGSGKYISKKDLLLLQKQLQGEIRIGGDPAIFSAMSVVAEMMKVNHAVEMVETQGLET
LRKYLEKLEAEASSSSASKAAKRLMDDLYMRKALYRVKECDVEHPKLELSRKIVSEQLEE
NPDSRVIVFTNYRDTAEIVANALSKAPGIVPIRFVGQGSRHKDKGLTQKQQVEILEKFRA
GEYNALVATSVAEEGLDIPSTDMVLFYEPIPSEIRSIQRKGRTGRQQKGRVIVLVTKGTR
DEAYYWSSKNKEKRMLNSMHGLETIFTPKASKKSAELSDFESRSCTSDSKLKIEEIEMEN
EDEDENGINISSENLRKNAKERQQTLVDFEALCGKKSENKSEISGKEPETEPLRIVIDHR
ETKCGVAKTLDRLGMELSFAALEIGDYVVSDRLAVERKRTDDFASSLIDGKRNLFAQLSD
LARVYEKPVLIIEGEDLFTSRQINPNAIYGSLVSITIDFGVSILNSRDEAETASILKLLA
KKEQTENKNEINPHGKKSASTLAEQQEYLISSISNIGPKAARNLLLHFGSVEAIMRANIE
ELKKVKLIGPKTAAKIREILESSYKG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatccattgataaagcccgaaacagttgagcagaggctttaccagcttaacctt
gcaggaaaagccctggagggatcaagcctggttgtactccccacagggcttggaaaaacc
attatagctctttttgtaattgtttccaggctccagcgtttcgggggaaaagccctgatc
ctttctcctacaaaacctcttgtagaccagcatgccgccttttttaaaaaggtgatgacc
cttcccgaagaagagattctggcttttacaggcagcattgcccctgctgagcgggaaaag
ctctgggcacgggggaagctgatagtatctaccccccaggtgattgaaaacgaccttctt
acgaaacggatcagccttgaagatgtaagccacatcacctttgatgaagcccacagggca
gtcggaaattatgcttatacctttattgcggaaaagtactttgagagcgcaaaaaatccc
catgtgctcggaattactgcaagtccgggcagctcggacgagaaaatcgcagaggtttgc
caggctttacatgttgaaaacgtagctgtgaaaaccgagaaagacagagatgttcgccct
tatgtgcaggaaaaagaaatagaatggctccaagttctgcttcctgccgaaatggctgaa
attcggggctatcttgaaaagatcttcgatgatcggctgaaaaccataagagagctgggc
ttttctgcaggcagtggaaaatacatctccaaaaaagacctcctgcttctccagaaacaa
cttcagggtgaaatccgtatagggggagaccctgcaatattctctgccatgtctgtggtc
gcggagatgatgaaggtgaaccacgctgtggaaatggtggagacacaggggcttgagact
ctaagaaaatacctggagaaattggaggctgaagcctcttccagcagtgcgagcaaagct
gcaaaacggctcatggatgatctttacatgagaaaagccctgtacagggtaaaggaatgt
gatgtagaacatcctaaactcgagctttcacggaagatcgtatccgaacagctggaagaa
aaccccgattcccgggtaattgtgtttaccaactacagggacactgccgaaatagtagca
aatgccctttctaaggctccgggaattgtccctattcgttttgtggggcagggttcgcgt
cataaagacaaaggacttacgcaaaagcagcaggtggaaatcctcgaaaaattcagggca
ggggaatacaatgcccttgtagccacttcagttgctgaagaagggcttgatatcccttcc
acggacatggttttattttacgaacccatcccctcggaaatccgcagcatccagcgcaag
ggcaggaccggcaggcagcaaaaaggtagagtaattgtgcttgtgacaaaaggcacgcgg
gacgaagcctattactggagcagcaaaaataaggaaaaaaggatgcttaacagcatgcat
gggcttgaaaccatctttaccccaaaagcttcaaagaagagtgcagaactttcggatttc
gaaagccgatcctgtacttcagactcaaagttgaaaatagaagaaatcgaaatggaaaac
gaggatgaagacgagaacggcatcaatatcagttctgagaatctcaggaaaaacgcaaaa
gagaggcaacaaaccctggtagacttcgaagctctttgcggaaagaaatctgaaaataaa
tcggaaatatccggaaaagaacccgaaaccgagcctctcagaatagtgattgaccacagg
gagacgaaatgcggagttgcaaagaccctggacaggctcgggatggaactcagctttgcg
gctctcgaaatcggagactacgtggtaagcgaccgccttgcagtagaaagaaagcgcacg
gatgactttgcaagttctctgatcgacggaaaacgcaacctttttgcccagctctctgac
cttgcgcgagtgtacgaaaaacctgtcctgattattgaaggggaagatctttttacttcc
aggcagatcaacccgaacgctatttacggttcacttgtatccattacaatcgactttgga
gtatccatccttaattccagagatgaggcagaaacagcttctattttgaaactactcgca
aaaaaggagcagacagaaaacaaaaatgaaatcaatcctcacggaaagaaatctgccagc
actcttgccgagcagcaggaataccttatttcttctatttcgaatatcgggccaaaagcc
gcaagaaacctccttttgcatttcggctcggtagaagctattatgagggctaatattgaa
gagctgaagaaagtaaaactaataggaccaaaaacagcagccaaaatcagagaaatcctc
gaaagttcatataaagggtaa
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