Metamycoplasma equirhinis: JPM7_2640
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Entry
JPM7_2640 CDS
T09202
Name
(GenBank) hypothetical protein
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
meqr
Metamycoplasma equirhinis
Pathway
meqr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meqr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JPM7_2640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meqr03021
]
JPM7_2640
03400 DNA repair and recombination proteins [BR:
meqr03400
]
JPM7_2640
Enzymes [BR:
meqr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JPM7_2640
Transcription machinery [BR:
meqr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JPM7_2640
DNA repair and recombination proteins [BR:
meqr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JPM7_2640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BDX52657
LinkDB
All DBs
Position
325328..329725
Genome browser
AA seq
1465 aa
AA seq
DB search
MKKSSKYDLLQEERIAKISLALATPEDVVKWSHGEVTKPETINYKSYKPERGGLFDEIIF
GPIIDYRCPVCGYKYKKINEGEYCTRTELCRQEHVEILPKMARRNHMGHIKLNSPVVHFW
YFKVDHSIIYKLLGLRTSKGQDSVRREELENLIYYKNHIVLEDGGLKSLPKNQIIEINDA
AVIYKAALEELLLRFEENSEAYEDIKDTLDTLVDKATSKIGQEYGIDFYELNEVIEHYCD
AKIGTGALAIEYLLKNLDLQKEKEFVSEEIRKLNSEEFANPEKFASTSKQNREKLYKRLQ
VINAFIESKQDPTSMLIYNLPVIPADLRPLIQLDGGRHSTSDINELYRRVIIRNNRLQQW
QEKDAPTLVIQNELRMIQEAVDALIDNQRRSPNPVLSKDNRPFKSISDALTGKKGRFRQN
LLGKRVDYSGRSVIVVGPSLKMHQCGIPREMAAKLFEPWIISRLIEKEVATTIKNAKKII
EDQNPIIWPHVAEAIKGKLVLLNRAPTLHRLSIQAFEPVLVRGKAIKLHPLVCTPFNADF
DGDQMAVHVPISEKALLESRELMLANKNILGPKDGEPIINPSQDMILGLYYLTIEEENAK
GEGRVFDNFDHMMRALENKKVSLHARVAMPAEQVKDYRLLNPSATPQYVISSVGKFIFNN
IFPKSFPFIYDNNVNKAISLEEYNKTFNNKYVVSAPTDISEYIKHELSLQEGFNKKNIAK
IIRYIFDKYVATTTVAEIASVIDKLDDSNEVGILKNFMELKSYKNENIDKEHALLLDEFT
KQARDKVDALNIYRASKAQDDEIKIPLTPEEKAQILDEVWFKYTNFVASILDNIKQLGFD
YSTTSGISISFSDILETDKKEEFILEGDQYIAKLKQYYDQGLITDDDRYSLTIKKWADIK
ESLQKVLEDIIKSNPQNPVITMINSGARGNIANYVQLAGMRGLMANNTKTTKADAKNDRV
VRSTVEVPVKSSFIEGLTAFEFYSSTHGARKGLTDTALNTAKSGYLTRRLVDVAQNIVVR
QENCGSDYGYVAQDIIDTKNNQIIVSLKERIVGRFTNKPVISPSGVMVCDRNVLITEKIA
KRIEDLGITEVEIRSILGCNTRNGVCKMCFGKDLATNRIVNIGEAVGIIAAQSIGEPGTQ
LTMRTFHTGGVAGVEDITGGFTRLIELIDAHEQPWGRPAVISPYAGKVTKIEKSETDETS
YLISIEIKNAKNVKTIQKIFVSTNKKLRVEIGSEIEIGQKISEGPIILKELLNLTDTITV
QNYLLKEIQRIYRIQGIAISDKYIEIIIRQMMSKIVISDPGDSKFFAGAIVDIFDYQEEN
AQLLTKGLKPAFGKVVIKGAKQVPLLSDSFLAAASYQETSKILVHAAISSRTDTLSGLKE
NIIVGKRIPSGTALYPFESYSKYDIKPSIAYFKNINEDAELESTENIDIDAIIQEVHDDY
SPSDEEQIVINEESENLDYEKIWEE
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagtagtaaatatgacttattgcaagaagaaagaattgctaaaatttcatta
gctcttgcaacccctgaagatgtcgttaaatgatctcatggtgaagttacgaagccagaa
accattaattacaaaagttataaaccagaacgtggtggattatttgatgaaataattttc
ggccctattattgattatcgttgtccagtctgtggctataaatacaaaaaaataaatgaa
ggcgaatattgtacaagaacagaactttgtcgtcaagaacatgtggaaatattgcccaaa
atggcacgtagaaatcatatgggacatattaaattaaatagtcctgtagttcacttttga
tatttcaaagttgatcactcaattatttacaaattattaggtttaaggacaagtaaaggc
caagattcagttcgtcgtgaagaacttgaaaacttaatttactataaaaatcatatcgtt
ttagaagacggtggtttaaaatcattacctaaaaatcaaattattgaaattaatgatgct
gccgttatatataaagcggcactagaagaattgcttttacgctttgaagaaaatagcgaa
gcttatgaagatattaaagatactcttgacacattagttgataaagcaacttctaaaatt
ggccaagaatacggtattgatttctatgaattaaacgaagttattgaacattattgtgat
gctaaaattggtaccggcgctttagcaattgaatatttattaaaaaatcttgatctacaa
aaagaaaaggaatttgtttctgaagaaattagaaaattaaattctgaagaatttgcaaac
cctgaaaaatttgcttcaacttcgaaacaaaatcgtgaaaaattatacaaacgtttacaa
gtgattaatgcatttattgaatcaaagcaagatccaacaagtatgttaatttacaatttg
ccggttattcccgctgatttacgtccattaattcaattagatggtggtcgtcactcaact
tctgatattaacgaattatatcgccgggtaattattagaaataaccgactacaacaatga
caagaaaaagatgctcctactttagttatccaaaatgaacttagaatgattcaagaagca
gttgacgctttaattgacaaccaaagaagaagtccaaaccctgttttatcaaaagataat
cgtccatttaaatcaattagcgacgctctgaccggaaaaaaaggccgttttagacaaaat
ctattaggaaaacgtgttgattattctggtcgttcagttattgttgttggcccatcactt
aaaatgcatcaatgtggtattcctcgtgaaatggcagcaaaattatttgagccatgaatt
atttcacgtttaatcgaaaaagaagtagcaaccacaattaaaaacgctaagaaaataatt
gaagatcaaaatcctattatttgacctcacgttgctgaggctattaagggaaaattagtg
cttttaaaccgggcaccaaccttacatagactttcaattcaagcttttgaaccagtttta
gtacgtggaaaagctattaaattacacccattagtatgtactccatttaacgccgatttt
gatggtgaccaaatggctgttcacgtgcctatttcagaaaaagctttattagaaagccgt
gaattaatgcttgctaataaaaatattttgggtccaaaagatggcgaacctattattaat
ccttcacaagatatgattctaggtctttactatttaacaattgaggaagaaaatgctaag
ggcgaaggcagggtatttgataactttgaccatatgatgcgtgcgcttgaaaacaaaaaa
gtttcattacacgcaagggttgcaatgccagcggaacaagttaaagattatcgtttgctt
aatccatcagcaacaccacaatatgtaatttcgtcagtaggtaaatttatttttaacaat
atctttcctaaatcattcccatttatttacgataataatgtaaataaagcaatttcattg
gaagaatataacaaaacattcaataacaaatatgttgtatctgcgccaactgacatttca
gagtatataaagcatgaattatcattgcaagaaggattcaacaagaaaaatattgccaaa
attattcgttatatttttgataaatatgttgcaacaactactgtcgcagaaattgcatca
gtaattgataaattagatgatagtaatgaagttggcattttgaagaacttcatggaattg
aaatcatataaaaatgaaaatattgacaaagaacacgcattattattagatgaatttact
aaacaagctagagacaaagtggatgcgttaaatatttatcgtgcatctaaagcacaagat
gatgaaatcaaaattcctttaactcctgaagaaaaagctcaaattttagatgaagtttga
tttaaatatacaaactttgttgcttcaatattagacaatatcaaacaactaggatttgac
tattcaactacatctggtatctcgatttcattttcagatattttagaaaccgataaaaaa
gaagaatttattcttgaaggtgaccaatatattgctaaattgaaacaatactacgatcaa
ggtttaattactgatgatgatagatactcgttaacaatcaaaaaatgagccgatattaaa
gaatcacttcaaaaggtattagaggatattattaaatcaaacccacaaaatcctgttatt
acaatgattaattcgggtgctcgtggtaatattgctaactatgtccaattagctggtatg
cgtggattaatggctaacaacacaaaaactactaaagccgatgctaaaaacgatagagtt
gttagatcaactgttgaagttcctgttaaatcatcgtttattgagggacttactgcattt
gaattctattcatcaactcatggtgctagaaaaggtctaactgataccgccttaaacact
gctaaatctggatatttaacaagaagattagttgatgtagctcaaaacattgttgtaaga
caagaaaactgtggttctgattatggatatgtagcacaagatattatcgatactaaaaat
aatcaaattattgtttcactaaaagaaagaattgttggtagatttactaataaaccagta
atttcgccaagtggtgtaatggtttgcgatcgtaacgtcttaattactgaaaaaatagct
aaaagaatcgaagatttaggtattaccgaggttgagattagatcaattttgggctgcaac
actcgtaacggtgtatgtaaaatgtgttttggtaaagacttggcaacaaatagaattgtt
aacatcggagaagctgttggtattattgctgctcaatcaatcggtgaacctggtacacag
ttaacaatgcgtaccttccatactggtggtgtcgctggtgtagaggatattactggtggt
tttactagacttattgaattaattgatgctcacgaacaaccatgaggtcgccctgcagta
atttctccttatgctggaaaagttacaaaaatcgaaaaatctgaaactgatgaaacttca
tatttaatttcaattgaaatcaaaaatgcaaaaaatgtaaaaacaatacaaaaaattttt
gtctcaacaaataaaaaattaagagtagaaattggatcagaaatcgaaattggtcaaaaa
atatcagaaggtccaatcattttaaaagaattattgaatttaactgatacaattaccgtt
caaaattatttactaaaagaaattcaaagaatttatcgtattcaaggtattgcaattagc
gacaaatatatcgaaattattattcgccaaatgatgtcaaaaattgtaattagtgatcct
ggtgattcgaaattctttgctggtgcaattgttgatatttttgactatcaagaagaaaat
gctcaattattgactaaaggtcttaaaccagcatttggtaaagttgtaatcaaaggtgca
aaacaagttcctttattatctgattcatttttagcagctgcttcatatcaagaaacttca
aaaattttggttcatgcagcgatctcttcaagaacagatactttaagtggtctaaaagaa
aatattattgttggtaagagaattccttcaggaacagctttatatccttttgaatcttat
tcaaaatatgatattaaaccatcaatagcatattttaagaacataaatgaagatgctgaa
ttagaatcaactgaaaatatagatattgacgctattattcaagaagttcatgacgattat
agcccatctgatgaagaacaaattgtcattaatgaagaaagcgaaaacttagattacgaa
aaaatttgagaagaatag
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integrated database retrieval system
